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L3_098_000M1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_50_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

409..825
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7B5W1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10540.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_50_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(883..1674)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5ZGH0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10541.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_50_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1806..3131)
DNA (1326bp) protein (442aa)
Outer membrane efflux protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5V8_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EEC98187.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
outer membrane protein TolC
L3_098_000M1_scaffold_50_4
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3176..6211)
DNA (3036bp) protein (1012aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DDQ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76914.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
multidrug efflux membrane fusion protein
L3_098_000M1_scaffold_50_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6221..7318)
DNA (1098bp) protein (366aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5V6_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEC98185.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
membrane fusion protein
L3_098_000M1_scaffold_50_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7507..9561)
DNA (2055bp) protein (685aa)
F5/8 type C domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5V5_9PORP
F5/8 type C domain protein {ECO:0000313|EMBL:EEC98184.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
glycoside hydrolase
L3_098_000M1_scaffold_50_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9566..11020)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DLT1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76911.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_098_000M1_scaffold_50_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11017..12672)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5V3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98182.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transmembrane protein
L3_098_000M1_scaffold_50_9
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12853..14604)
DNA (1752bp) protein (584aa)
SusD family protein n=3 Tax=Parabacteroides RepID=B7B5V2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76909.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_098_000M1_scaffold_50_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14624..17920)
DNA (3297bp) protein (1099aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=B7B5V1_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN10549.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
TonB-denpendent receptor
L3_098_000M1_scaffold_50_11
unknown

Not on your lists

18662..18892
DNA (231bp) protein (77aa)

This feature has no annotations

L3_098_000M1_scaffold_50_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18826..19779)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5V0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98179.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_098_000M1_scaffold_50_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20038..20712
DNA (675bp) protein (225aa)
Succinate dehydrogenase cytochrome B subunit, b558 family n=2 Tax=Parabacteroides johnsonii RepID=B7B5U8_9PORP
B558 family succinate dehydrogenase (Or fumarate reductase) cytochrome B subunit {ECO:0000313|EMBL:EKN09893.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
cytochrome subunit B
L3_098_000M1_scaffold_50_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20751..22694
DNA (1944bp) protein (648aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:EEC98176.1}; EC=1.3.5.1 {ECO:0000313|EMBL:EEC98176.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit n=2 Tax=Parabacteroides johnsonii RepID=B7B5U7_9PORP
L3_098_000M1_scaffold_50_15
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22722..23477
DNA (756bp) protein (252aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=3 Tax=Parabacteroides RepID=B7B5U6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76311.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L3_098_000M1_scaffold_50_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24063..25094)
DNA (1032bp) protein (344aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
tRNA-dihydrouridine synthase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5U3_9PORP
TIM-barrel enzyme
L3_098_000M1_scaffold_50_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25252..25608
DNA (357bp) protein (119aa)
Transcriptional regulator, BlaI/MecI/CopY family n=3 Tax=Parabacteroides RepID=B7B5U2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09897.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L3_098_000M1_scaffold_50_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25621..27390
DNA (1770bp) protein (590aa)
Peptidase, M56 family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5U1_9PORP
Peptidase, M56 family {ECO:0000313|EMBL:EEC98218.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transcriptional regulator
L3_098_000M1_scaffold_50_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27540..28775
DNA (1236bp) protein (412aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7B5U0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09899.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_50_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28842..30038
DNA (1197bp) protein (399aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7B5T9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98216.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_098_000M1_scaffold_50_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30117..31352
DNA (1236bp) protein (412aa)
Peptidase, U32 family {ECO:0000313|EMBL:EEC98215.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEC98215.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Peptidase, U32 family n=2 Tax=Parabacteroides RepID=B7B5T8_9PORP
collagenase
L3_098_000M1_scaffold_50_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31352..31759
DNA (408bp) protein (136aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=4 Tax=Parabacteroides RepID=B7B5T7_9PORP
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EKN09902.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
thioesterase
L3_098_000M1_scaffold_50_23
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31756..32871
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DEP5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78680.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
DNA processing Smf-like protein
L3_098_000M1_scaffold_50_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33121..34017)
DNA (897bp) protein (299aa)
Glycerophosphodiester phosphodiesterase family protein n=2 Tax=Parabacteroides johnsonii RepID=B7B5T5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09904.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glycerophosphoryl diester phosphodiesterase
L3_098_000M1_scaffold_50_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34752..35114
DNA (363bp) protein (121aa)
Transcriptional regulator, BlaI/MecI/CopY family n=6 Tax=Parabacteroides RepID=A7A9Q4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09905.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L3_098_000M1_scaffold_50_26
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35135..36871
DNA (1737bp) protein (579aa)
TonB-dependent receptor n=2 Tax=Parabacteroides RepID=B7B5T2_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EEC98209.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
TonB
L3_098_000M1_scaffold_50_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36905..38458
DNA (1554bp) protein (518aa)
Tetratricopeptide repeat protein n=3 Tax=Parabacteroides RepID=B7B5T1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09907.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_50_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38493..39662
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A2K4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09908.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_098_000M1_scaffold_50_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39681..40883
DNA (1203bp) protein (401aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B5S9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09909.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_50_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40890..41465
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZFA5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09910.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Displaying items 1-30 of 86 in total

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