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L3_098_000M1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_55_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..309
DNA (309bp) protein (103aa)
HD domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGJ47032.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
metal dependent phosphohydrolase
L3_098_000M1_scaffold_55_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

663..860
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=B6FQA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22571.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_55_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

835..1914
DNA (1080bp) protein (360aa)
N-acetyltransferase GCN5 (EC:2.3.1.-)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22572.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_55_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2130..2591
DNA (462bp) protein (154aa)
UPF0178 protein CLONEX_02321 n=2 Tax=Clostridium RepID=B6FQA2_9CLOT
UPF0178 protein BN618_00367 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_55_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2619..3152
DNA (534bp) protein (178aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FQA1_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA81797.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Acetyltransferases
L3_098_000M1_scaffold_55_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3221..3823)
DNA (603bp) protein (201aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22575.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_55_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3952..5346
DNA (1395bp) protein (465aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridium RepID=B6FQ99_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEA81795.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_098_000M1_scaffold_55_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5607..5849
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22577.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_55_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6601..7782
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81791.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_55_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7772..8038
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22580.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Coenzyme PQQ synthesis protein D (PqqD).
L3_098_000M1_scaffold_55_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8162..9796
DNA (1635bp) protein (545aa)
Cell envelope-like function transcriptional attenuator common domain protein n=2 Tax=Clostridium RepID=B6FQ93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22581.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cell envelope-related function transcriptional attenuator common domain
L3_098_000M1_scaffold_55_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10028..13330
DNA (3303bp) protein (1101aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ92_9CLOT
L3_098_000M1_scaffold_55_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13343..15817
DNA (2475bp) protein (825aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ91_9CLOT
L3_098_000M1_scaffold_55_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16009..17451
DNA (1443bp) protein (481aa)
Divergent AAA domain protein n=2 Tax=Clostridium RepID=B6FQ90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22584.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
divergent AAA domain-containing protein
L3_098_000M1_scaffold_55_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17697..22820
DNA (5124bp) protein (1708aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ89_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA81785.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_55_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22866..23753
DNA (888bp) protein (296aa)
SpoIID/LytB domain protein n=2 Tax=Clostridium RepID=B6FQ88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22586.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
stage II sporulation protein D
L3_098_000M1_scaffold_55_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23796..24545
DNA (750bp) protein (250aa)
Peptidase, M23 family n=2 Tax=Clostridium RepID=B6FQ87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22587.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Membrane-bound metallopeptidase
L3_098_000M1_scaffold_55_18
unknown

Not on your lists

24752..24841
DNA (90bp) protein (30aa)

This feature has no annotations

L3_098_000M1_scaffold_55_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24852..25826
DNA (975bp) protein (325aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B6FQ86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23639.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L3_098_000M1_scaffold_55_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26892..31502
DNA (4611bp) protein (1537aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23640.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_55_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31789..32181
DNA (393bp) protein (131aa)
GIY-YIG catalytic domain protein n=2 Tax=Clostridium RepID=B6FQ79_9CLOT
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EEA81817.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted endonuclease containing a URI domain
L3_098_000M1_scaffold_55_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32247..32987
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81816.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_55_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33113..34063
DNA (951bp) protein (317aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ77_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA81815.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase component
L3_098_000M1_scaffold_55_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34047..34913
DNA (867bp) protein (289aa)
ABC-2 type transporter n=2 Tax=Clostridium RepID=B6FQ76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23644.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_55_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34926..36305
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23645.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L3_098_000M1_scaffold_55_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36318..37220
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23646.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_55_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37266..37919)
DNA (654bp) protein (218aa)
Channel protein, hemolysin III family n=2 Tax=Clostridium RepID=B6FQ73_9CLOT
Channel protein, hemolysin III family {ECO:0000313|EMBL:EEA81811.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
channel protein, hemolysin III family
L3_098_000M1_scaffold_55_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38212..39804
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PH13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23648.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Superfamily II DNA and RNA helicases
L3_098_000M1_scaffold_55_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39905..40507
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PSC7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23649.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_55_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40510..41076
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23650.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted membrane protein
Displaying items 1-30 of 119 in total

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