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L3_098_000M1_scaffold_77

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Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_77_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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598..1995
DNA (1398bp) protein (466aa)
Magnesium transporter n=1 Tax=Clostridium sp. SS2/1 RepID=B0NWL2_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Mg2+ transporter (mgtE)
L3_098_000M1_scaffold_77_2
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(2052..4448)
DNA (2397bp) protein (799aa)
Diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYF9_9FIRM
Diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG {ECO:0000313|EMBL:CDD70770.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG
L3_098_000M1_scaffold_77_3
unknown

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4760..5761
DNA (1002bp) protein (334aa)
K+-dependent Na+/Ca+ exchanger related-protein n=3 Tax=Clostridiales RepID=D4MZ19_9FIRM
K+-dependent Na+/Ca+ exchanger related-protein
K+-dependent Na+/Ca+ exchanger related-protein {ECO:0000313|EMBL:CBL37864.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_77_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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5826..6815
DNA (990bp) protein (330aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QB54_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EKY24822.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted dehydrogenases and related proteins
L3_098_000M1_scaffold_77_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6812..7627
DNA (816bp) protein (272aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=1 Tax=Clostridium sp. SS2/1 RepID=B0NWK2_9CLOT
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EDS23365.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_098_000M1_scaffold_77_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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7651..9042
DNA (1392bp) protein (464aa)
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs n=3 Tax=Clostridiales RepID=D4MZ16_9FIRM
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs {ECO:0000313|EMBL:CDA31313.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_77_7
unknown

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9061..10446
DNA (1386bp) protein (462aa)
Endopeptidase Clp ATP-binding regulatory subunit (ClpX) n=3 Tax=Clostridiales RepID=D4MZ15_9FIRM
endopeptidase Clp ATP-binding regulatory subunit (clpX)
Endopeptidase Clp ATP-binding regulatory subunit (ClpX) {ECO:0000313|EMBL:CBL37860.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_77_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10552..11577)
DNA (1026bp) protein (342aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain amino acid aminotransferase, group II n=4 Tax=Clostridiales RepID=D4MZ14_9FIRM
Branched-chain amino acid aminotransferase group II {ECO:0000313|EMBL:CDA31315.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_77_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11696..12754)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=L1QB50_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY24817.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_77_10
unknown

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12990..14936
DNA (1947bp) protein (649aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854, ECO:0000313|EMBL:CBL37857.1};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
hypothetical protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=3 Tax=Clostridiales RepID=D4MZ12_9FIRM
L3_098_000M1_scaffold_77_11
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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15021..16697
DNA (1677bp) protein (559aa)
Peptidase S8/S53 family n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YV48_9FIRM
Peptidase S8/S53 family {ECO:0000313|EMBL:CDA31323.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Subtilisin-like serine proteases
L3_098_000M1_scaffold_77_12
unknown

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comp(16713..18029)
DNA (1317bp) protein (439aa)
Polysaccharide biosynthesis protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLB8_9FIRM
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CBL37855.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_77_13
unknown

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18165..18623
DNA (459bp) protein (153aa)
Transcriptional regulator, BadM/Rrf2 family n=2 Tax=Clostridiales RepID=D4MZ09_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBL37854.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_77_14
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18626..19810
DNA (1185bp) protein (395aa)
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Cysteine desulfurase NifS n=4 Tax=Clostridiales RepID=D4MZ08_9FIRM
L3_098_000M1_scaffold_77_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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19885..20322
DNA (438bp) protein (146aa)
FeS cluster assembly scaffold protein NifU, Clostridium type n=5 Tax=Clostridiales RepID=D4MZ07_9FIRM
FeS cluster assembly scaffold protein NifU, Clostridium type
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:CDA31327.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_77_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20356..21423
DNA (1068bp) protein (356aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLB4_9FIRM
L3_098_000M1_scaffold_77_17
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21457..22380
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NWJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS23353.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Predicted membrane protein
L3_098_000M1_scaffold_77_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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22654..23310
DNA (657bp) protein (219aa)
Response regulator receiver domain-containing protein n=3 Tax=Lachnospiraceae RepID=E5VLB2_9FIRM
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:EKY24808.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
two component transcriptional regulator
L3_098_000M1_scaffold_77_19
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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23349..24791
DNA (1443bp) protein (481aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Hsp90-like protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZB48_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_098_000M1_scaffold_77_20
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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24943..25722
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NWI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA31332.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L3_098_000M1_scaffold_77_21
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25732..26337
DNA (606bp) protein (202aa)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Imidazole glycerol phosphate synthase subunit HisH n=3 Tax=Clostridiales RepID=D4MZ03_9FIRM
L3_098_000M1_scaffold_77_22
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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26350..27111
DNA (762bp) protein (254aa)
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Clostridiales RepID=D4MZ02_9FIRM
L3_098_000M1_scaffold_77_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27256..27561
DNA (306bp) protein (102aa)
YcfA-like protein n=3 Tax=Clostridiales RepID=D4MZ01_9FIRM
YcfA-like protein.
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EKY24802.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_77_24
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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27545..27907
DNA (363bp) protein (121aa)
Uncharacterized conserved protein n=5 Tax=Clostridiales RepID=D4MZ00_9FIRM
hypothetical protein
HicB family protein {ECO:0000313|EMBL:EFV16417.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_098_000M1_scaffold_77_25
unknown

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28055..28369
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NWI1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL37844.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_77_26
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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28362..28796
DNA (435bp) protein (145aa)
Oxidoreductase n=2 Tax=Lachnospiraceae RepID=L1QA16_9FIRM
Oxidoreductase {ECO:0000313|EMBL:EKY24799.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
C_GCAxxG_C_C family probable redox protein
L3_098_000M1_scaffold_77_27
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28914..29684)
DNA (771bp) protein (257aa)
BadF/BadG/BcrA/BcrD ATPase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLA4_9FIRM
BadF/BadG/BcrA/BcrD ATPase {ECO:0000313|EMBL:EFV16415.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
CoA-substrate-specific enzyme activase, putative
L3_098_000M1_scaffold_77_28
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29777..33127)
DNA (3351bp) protein (1117aa)
CoA-substrate-specific enzyme activase, putative n=2 Tax=Clostridiales RepID=D4MYZ7_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EDS23342.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
CoA-substrate-specific enzyme activase, putative
L3_098_000M1_scaffold_77_29
unknown

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33288..33689
DNA (402bp) protein (134aa)
LysM domain n=5 Tax=Clostridiales RepID=D4MYZ6_9FIRM
LysM domain.
LysM domain {ECO:0000313|EMBL:CBL37841.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_77_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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33814..34746
DNA (933bp) protein (311aa)
Mg2+ and Co2+ transporters n=5 Tax=Clostridiales RepID=D4MYZ5_9FIRM
Mg2+ and Co2+ transporters
CorA-like Mg2+ transporter {ECO:0000313|EMBL:CDA31340.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Displaying items 1-30 of 109 in total

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