ggKbase home page

L3_098_000M1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 189 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_88_1
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

127..753
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Putative phosphoribosylglycinamide formyltransferase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A3H3_9BACE
phosphoribosylglycinamide formyltransferase
L3_098_000M1_scaffold_88_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(795..1844)
DNA (1050bp) protein (350aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019216}; EC=1.1.1.290 {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019244};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
4-phosphoerythronate dehydrogenase (EC:1.1.1.290)
Erythronate-4-phosphate dehydrogenase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSL7_BACSE
L3_098_000M1_scaffold_88_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1957..2508
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSL8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14794.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
DNA-binding domain-containing protein
L3_098_000M1_scaffold_88_4
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2608..3324
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AIM2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46391.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_88_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3332..4096
DNA (765bp) protein (255aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NSM0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14796.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_098_000M1_scaffold_88_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4104..5003
DNA (900bp) protein (300aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS14797.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS14797.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Glycosyltransferase, group 2 family protein n=3 Tax=Bacteroides RepID=B0NSM1_BACSE
glycosyl transferase family protein
L3_098_000M1_scaffold_88_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5015..5896)
DNA (882bp) protein (294aa)
Capsular polysaccharide synthesis protein n=2 Tax=Bacteroides stercoris RepID=B0NSM2_BACSE
Capsular polysaccharide synthesis protein {ECO:0000313|EMBL:EDS14798.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Capsular polysaccharide synthesis protein.
L3_098_000M1_scaffold_88_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5893..6669)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NSM3_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21568.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_098_000M1_scaffold_88_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6673..7536)
DNA (864bp) protein (288aa)
Glycosyltransferase, family 11 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSM4_BACSE
Glycosyltransferase, family 11 {ECO:0000313|EMBL:EDS14800.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
glycosyl transferase
L3_098_000M1_scaffold_88_10
unknown

Not on your lists

comp(7523..7612)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_098_000M1_scaffold_88_11
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7788..8807
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AZ17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46397.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative lipopolysaccharide core biosynthesis protein
L3_098_000M1_scaffold_88_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8817..9737
DNA (921bp) protein (307aa)
Glycosyltransferase, family 8 n=3 Tax=Bacteroides RepID=B0NSM6_BACSE
Glycosyltransferase family 8 {ECO:0000313|EMBL:CDA46398.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative lipopolysaccharide 1,2-glucosyltransferase/general stress protein
L3_098_000M1_scaffold_88_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9793..10698
DNA (906bp) protein (302aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS14803.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS14803.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Bacteroides stercoris RepID=B0NSM7_BACSE
glycosyl transferase
L3_098_000M1_scaffold_88_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10706..11815)
DNA (1110bp) protein (370aa)
UDP-galactopyranose mutase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YEY2_BACSE
UDP-galactopyranose mutase {ECO:0000313|EMBL:EPH21574.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
UDP-galactopyranose mutase
L3_098_000M1_scaffold_88_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12046..13884
DNA (1839bp) protein (613aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=B0NSN0_BACSE
ATP-binding cassette, subfamily B, bacterial MsbA {ECO:0000313|EMBL:EPH21575.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
putative transport ATP-binding protein
L3_098_000M1_scaffold_88_16
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13848..14024)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGX5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21576.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_098_000M1_scaffold_88_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14411..15055)
DNA (645bp) protein (215aa)
Predicted double-stranded RNA/RNA-DNA hybrid binding protein (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSN1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14807.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_098_000M1_scaffold_88_18
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15234..15836
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NSN2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46403.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
nitroreductase
L3_098_000M1_scaffold_88_19
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15894..16421
DNA (528bp) protein (176aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC30_9BACE
L3_098_000M1_scaffold_88_20
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16533..18425
DNA (1893bp) protein (631aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Biosynthetic arginine decarboxylase n=2 Tax=Bacteroides RepID=R6A5W6_9BACE
putative arginine decarboxylase
L3_098_000M1_scaffold_88_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18425..19198
DNA (774bp) protein (258aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGX9_BACSE
L3_098_000M1_scaffold_88_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19260..19769
DNA (510bp) protein (170aa)
Sigma-70 region 2 n=3 Tax=Bacteroides RepID=B0NSN6_BACSE
Sigma-70 region 2 {ECO:0000313|EMBL:EDS14812.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_098_000M1_scaffold_88_23
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19759..20241
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NSN7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46408.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_88_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20458..21315)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NSN8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14814.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
lipoprotein
L3_098_000M1_scaffold_88_25
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21580..22284
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A5X0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46410.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_88_26
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22322..22717)
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NSP0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46411.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_88_27
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22914..23381
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=3 Tax=Bacteroides RepID=B0NSP1_BACSE
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_88_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23386..24651
DNA (1266bp) protein (422aa)
Transcription termination factor NusA n=2 Tax=Bacteroides stercoris RepID=B0NSP2_BACSE
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
NusA antitermination factor
L3_098_000M1_scaffold_88_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24786..27743
DNA (2958bp) protein (986aa)
Translation initiation factor IF-2 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSP3_BACSE
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
bacterial translation initiation factor 2 (bIF-2)
L3_098_000M1_scaffold_88_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27845..28357
DNA (513bp) protein (171aa)
CvpA family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSP4_BACSE
CvpA family protein {ECO:0000313|EMBL:EDS14820.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
Displaying items 1-30 of 189 in total

View Taxonomy