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L3_098_000M1_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_126_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(938..1540)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23423.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
formate/nitrite transporter
L3_098_000M1_scaffold_126_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1753..4977
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase, large subunit n=2 Tax=Clostridium RepID=B6FU07_9CLOT
L3_098_000M1_scaffold_126_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5162..9277
DNA (4116bp) protein (1372aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU06_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEA80500.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
metallophosphoesterase
L3_098_000M1_scaffold_126_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9434..10828
DNA (1395bp) protein (465aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=2 Tax=Clostridium RepID=B6FU05_9CLOT
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EEA80499.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_098_000M1_scaffold_126_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10821..11402
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23419.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
guanylate kinase
L3_098_000M1_scaffold_126_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11489..12478
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23418.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_126_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12482..13393
DNA (912bp) protein (304aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridium RepID=B6FU02_9CLOT
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEA80496.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized homolog of PSP1
L3_098_000M1_scaffold_126_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13383..14123
DNA (741bp) protein (247aa)
Methyltransferase domain protein n=2 Tax=Clostridium RepID=B6FU01_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EEA80495.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_126_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14139..14978
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU00_9CLOT
conserved hypothetical protein TIGR00096
L3_098_000M1_scaffold_126_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15102..16214
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ9_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80493.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_098_000M1_scaffold_126_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16277..17605
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEA80492.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_126_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17816..20419
DNA (2604bp) protein (868aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ7_9CLOT
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEA80491.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_098_000M1_scaffold_126_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20432..21580
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80490.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted permease
L3_098_000M1_scaffold_126_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21738..22655
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80489.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_126_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22652..23977
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80488.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_126_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23974..25485
DNA (1512bp) protein (504aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ3_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEA80487.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase family associated with various cellular activities (AAA).
L3_098_000M1_scaffold_126_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25519..26181
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23407.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
nucleoside recognition domain containing protein
L3_098_000M1_scaffold_126_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26414..27994
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PY75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23406.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_126_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28053..28688)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23405.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_126_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28823..29929
DNA (1107bp) protein (369aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PRL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23404.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_126_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29935..31260
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23403.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative efflux protein, MATE family
L3_098_000M1_scaffold_126_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31393..31914
DNA (522bp) protein (174aa)
Transporter gate domain protein n=2 Tax=Clostridium RepID=B6FTY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23402.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
spore maturation protein B
L3_098_000M1_scaffold_126_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32036..32197
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23401.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_126_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32487..33059
DNA (573bp) protein (191aa)
ATP synthase subunit a n=2 Tax=Clostridium RepID=B6FTY4_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
F0F1 ATP synthase subunit A
L3_098_000M1_scaffold_126_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33091..33318
DNA (228bp) protein (76aa)
ATP synthase F0, C subunit n=2 Tax=Clostridium RepID=B6FTY3_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_126_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33390..33893
DNA (504bp) protein (168aa)
ATP synthase subunit b n=2 Tax=Clostridium RepID=B6FTY2_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATP synthase F0 subunit B
L3_098_000M1_scaffold_126_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33874..34371
DNA (498bp) protein (166aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=2 Tax=Clostridium RepID=B6FTY1_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_126_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34376..35881
DNA (1506bp) protein (502aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP synthase subunit alpha n=2 Tax=Clostridium RepID=B6FTY0_9CLOT
ATP synthase F1 subunit alpha
L3_098_000M1_scaffold_126_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35883..36776
DNA (894bp) protein (298aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Clostridium RepID=B6FTX9_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_126_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36798..38189
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP synthase subunit beta n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX8_9CLOT
F-type H+-transporting ATPase subunit beta
Displaying items 1-30 of 60 in total

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