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L3_098_000M1_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_129_1
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..395)
DNA (393bp) protein (131aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M4S2_9BACL
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EGG37588.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
propeptide PepSY amd peptidase M4
L3_098_000M1_scaffold_129_2
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(545..1456)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG66_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ75617.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_098_000M1_scaffold_129_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1453..2181)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HE30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00376.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_098_000M1_scaffold_129_4
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2453..2872
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Clostridium sp. CAG:58 RepID=R6S094_9CLOT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
30S ribosomal protein S12
L3_098_000M1_scaffold_129_5
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3105..3575
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=2 Tax=Clostridium RepID=D4CHE6_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
30S ribosomal protein S7
L3_098_000M1_scaffold_129_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3618..5735
DNA (2118bp) protein (706aa)
Elongation factor G n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KLY8_9CLOT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
elongation factor G
L3_098_000M1_scaffold_129_7
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5836..7029
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Clostridium sp. CAG:81 RepID=R5G995_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_098_000M1_scaffold_129_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7160..7774
DNA (615bp) protein (205aa)
thiE; putative thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Putative thiamine-phosphate diphosphorylase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL54_9CLOT
Putative thiamine-phosphate diphosphorylase {ECO:0000313|EMBL:CCY42835.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_098_000M1_scaffold_129_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7761..8579)
DNA (819bp) protein (273aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL23_9CLOT
L3_098_000M1_scaffold_129_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8628..9344)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42840.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
thiW protein
L3_098_000M1_scaffold_129_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9742..10620
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0A064_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ45401.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
ypjC; membrane protein YpjC
L3_098_000M1_scaffold_129_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10741..12477
DNA (1737bp) protein (579aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97071.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_098_000M1_scaffold_129_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12532..13305
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42680.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_098_000M1_scaffold_129_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13523..14221
DNA (699bp) protein (233aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I1T1_9FIRM
L3_098_000M1_scaffold_129_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14232..15137
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X7X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY91776.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ROK family protein
L3_098_000M1_scaffold_129_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15233..16090
DNA (858bp) protein (286aa)
Transcriptional regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U303_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCZ63477.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
RpiR family transcriptional regulator
L3_098_000M1_scaffold_129_17
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16170..16811)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9K0A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36917.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Lysophospholipase L1 and related esterases
L3_098_000M1_scaffold_129_18
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16965..17888
DNA (924bp) protein (308aa)
N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase n=1 Tax=Eubacterium sp. 14-2 RepID=S0J1G1_9FIRM
N-acetylneuraminate lyase {ECO:0000313|EMBL:EOT26077.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L3_098_000M1_scaffold_129_19
unknown

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17964..18164
DNA (201bp) protein (67aa)

This feature has no annotations

L3_098_000M1_scaffold_129_20
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18161..19552
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZHL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63439.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
sugar ABC transporter substrate-binding protein
L3_098_000M1_scaffold_129_21
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19619..20515
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RWM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74440.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
acetylneuraminate ABC transporter permease
L3_098_000M1_scaffold_129_22
Streptococcus peroris, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20530..21354
DNA (825bp) protein (275aa)
sugar ABC transporter permease n=1 Tax=Streptococcus entericus RepID=UPI00037289DE
ABC transporter, permease protein {ECO:0000313|EMBL:EFX40095.1}; TaxID=888746 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus peroris ATCC 700780.;"
ABC transporter permease
L3_098_000M1_scaffold_129_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21809..23020
DNA (1212bp) protein (404aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
lysC; Aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL62_9CLOT
L3_098_000M1_scaffold_129_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23351..24802
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42859.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
carboxyl transferase
L3_098_000M1_scaffold_129_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24814..25647
DNA (834bp) protein (278aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL78_9CLOT
Oxaloacetate decarboxylase, gamma chain.
L3_098_000M1_scaffold_129_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25680..26066
DNA (387bp) protein (129aa)
Biotin carboxyl carrier protein (EC:4.1.1.41)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97067.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_098_000M1_scaffold_129_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26117..27262
DNA (1146bp) protein (382aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97066.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_098_000M1_scaffold_129_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27303..28715
DNA (1413bp) protein (471aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42865.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_098_000M1_scaffold_129_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28916..30532
DNA (1617bp) protein (539aa)
Two component transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1Q4_9CLOT
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CCY42867.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AraC family transcriptional regulator
L3_098_000M1_scaffold_129_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30529..31605
DNA (1077bp) protein (359aa)
Signal transduction histidine kinase LytS n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRG9_9CLOT
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:CCY42869.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
signal transduction histidine kinase LytS
Displaying items 1-30 of 61 in total

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