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L3_098_000M1_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_146_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..336
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P3H2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY21137.1}; Flags: Fragment;; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_146_2
unknown

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comp(333..575)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MWF7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39723.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_146_3
unknown

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667..942
DNA (276bp) protein (92aa)

This feature has no annotations

L3_098_000M1_scaffold_146_4
Takifugu rubripes, Takifugu, Tetraodontiformes, Neopterygii, Chordata, Metazoa

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1025..1552
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Takifugu rubripes RepID=H2U0X2_TAKRU
Uncharacterized protein {ECO:0000313|Ensembl:ENSTRUP00000030581}; Flags: Fragment;; TaxID=31033 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu.;" source="Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).;"
hypothetical protein
L3_098_000M1_scaffold_146_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1572..2033
DNA (462bp) protein (154aa)
Toxin secretion/phage lysis holin n=2 Tax=Clostridiales RepID=A5KPB6_9FIRM
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EDK23798.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
toxin secretion/phage lysis holin
L3_098_000M1_scaffold_146_6
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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2036..2584
DNA (549bp) protein (183aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDR98547.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDR98547.1};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAM2_9FIRM
N-acetylmuramoyl-L-alanine amidase
L3_098_000M1_scaffold_146_7
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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2791..4809
DNA (2019bp) protein (673aa)
Bacterial surface proteins containing Ig-like domains n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z029_9FIRM
Bacterial surface proteins containing Ig-like domains
Bacterial surface proteins containing Ig-like domains {ECO:0000313|EMBL:CDA33008.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_146_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5086..5262
DNA (177bp) protein (59aa)
xynB7; beta-xylosidase XynB (EC:3.2.1.37)
AraC family Bacterial regulatory helix-turn-helix protein n=2 Tax=Lachnospiraceae RepID=E5VMJ3_9FIRM
AraC family Bacterial regulatory helix-turn-helix protein {ECO:0000313|EMBL:CDA33007.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_146_9
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5375..6862)
DNA (1488bp) protein (496aa)
Sodium/pantothenate symporter n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZC4_9CLOT
Sodium/pantothenate symporter {ECO:0000313|EMBL:EDS22281.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
sodium/pantothenate symporter
L3_098_000M1_scaffold_146_10
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6863..7129)
DNA (267bp) protein (89aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0NZC3_9CLOT
Protein of unknown function (DUF997).
Uncharacterized protein {ECO:0000313|EMBL:EKY22424.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_146_11
unknown

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7335..7709
DNA (375bp) protein (125aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Clostridiales RepID=D4MXR8_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL37413.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_146_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7678..8193
DNA (516bp) protein (172aa)
N utilization substance protein B homolog n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q3G3_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
transcription antitermination factor NusB
L3_098_000M1_scaffold_146_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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8183..9403
DNA (1221bp) protein (407aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=2 Tax=Lachnospiraceae RepID=E5VMI8_9FIRM
L3_098_000M1_scaffold_146_14
unknown

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9421..9630
DNA (210bp) protein (70aa)
Exonuclease VII small subunit. (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Exodeoxyribonuclease 7 small subunit n=4 Tax=Clostridiales RepID=D4MXR5_9FIRM
L3_098_000M1_scaffold_146_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9620..10513
DNA (894bp) protein (298aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=3 Tax=Lachnospiraceae RepID=E5VMI6_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CDA33000.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_146_16
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10537..12408
DNA (1872bp) protein (624aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZB7_9CLOT
L3_098_000M1_scaffold_146_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12413..13234
DNA (822bp) protein (274aa)
Hemolysin TlyA family protein n=5 Tax=Clostridiales RepID=D4MXR2_9FIRM
hemolysin TlyA family protein
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:EKY22431.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_146_18
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13236..14096
DNA (861bp) protein (287aa)
Predicted sugar kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=5 Tax=Clostridiales RepID=D4MXR1_9FIRM
L3_098_000M1_scaffold_146_19
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14083..14541
DNA (459bp) protein (153aa)
Arginine repressor n=5 Tax=Clostridiales RepID=D4MXR0_9FIRM
transcriptional regulator, ArgR family
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_146_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14561..16243
DNA (1683bp) protein (561aa)
DNA repair protein RecN n=3 Tax=Clostridiales RepID=D4MXQ9_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
DNA replication and repair protein RecN
L3_098_000M1_scaffold_146_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16318..17535
DNA (1218bp) protein (406aa)
stage IV sporulation protein B (EC:3.4.21.116)
Stage IV sporulation protein B n=4 Tax=Clostridiales RepID=D4MXQ8_9FIRM
SpoIVB peptidase {ECO:0000313|EMBL:EKY22435.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_146_22
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17606..18745
DNA (1140bp) protein (380aa)
Exonuclease SbcD n=3 Tax=Clostridiales RepID=D4MXQ7_9FIRM
exonuclease SbcD
Phage tail component protein {ECO:0000313|EMBL:EKY22436.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_146_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18742..21525
DNA (2784bp) protein (928aa)
Exonuclease SbcCD, C subunit n=2 Tax=Clostridiales RepID=B0NZR4_9CLOT
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EKY22437.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
sbcC; exonuclease SbcC
L3_098_000M1_scaffold_146_24
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21545..21730
DNA (186bp) protein (62aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=L1Q389_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY22438.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_098_000M1_scaffold_146_25
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21903..22709
DNA (807bp) protein (269aa)
Sporulation transcription factor Spo0A n=4 Tax=Clostridiales RepID=D4MXQ5_9FIRM
sporulation transcription factor Spo0A
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_098_000M1_scaffold_146_26
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22730..23569
DNA (840bp) protein (280aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q412_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_098_000M1_scaffold_146_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23635..24450
DNA (816bp) protein (272aa)
Sporulation initiation factor Spo0A n=2 Tax=Lachnospiraceae RepID=E5VMH1_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Response regulator containing a CheY-like receiver domain and a GGDEF domain
L3_098_000M1_scaffold_146_28
unknown

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24476..25483
DNA (1008bp) protein (336aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0NZQ9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL37398.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_146_29
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25571..26116
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q393_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EKY22443.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
RNA polymerase sigma factor, sigma-70 family
L3_098_000M1_scaffold_146_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26171..26836)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z1V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32985.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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