ggKbase home page

L3_098_000M1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_156_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

287..4813
DNA (4527bp) protein (1509aa)
Leucine Rich Repeat protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGX9_9BACE
Leucine Rich Repeat protein {ECO:0000313|EMBL:EEY82383.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
internalin-like protein
L3_098_000M1_scaffold_156_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4817..8329
DNA (3513bp) protein (1171aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YYZ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61218.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_098_000M1_scaffold_156_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8378..8596
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AL11_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28704.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_098_000M1_scaffold_156_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8759..10261
DNA (1503bp) protein (501aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
2-isopropylmalate synthase n=2 Tax=Parabacteroides RepID=E1YYZ8_9PORP
2-isopropylmalate synthase
L3_098_000M1_scaffold_156_5
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10276..11673
DNA (1398bp) protein (466aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00274346};; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00091399};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
3-isopropylmalate dehydratase large subunit n=6 Tax=Bacteroidales RepID=A6LDN0_PARD8
L3_098_000M1_scaffold_156_6
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11700..12287
DNA (588bp) protein (196aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
3-isopropylmalate dehydratase small subunit LeuD n=8 Tax=Bacteroidales RepID=A6LDM9_PARD8
3-isopropylmalate dehydratase small subunit
L3_098_000M1_scaffold_156_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12290..13804
DNA (1515bp) protein (505aa)
2-isopropylmalate synthase n=4 Tax=Bacteroidales RepID=D7IRZ2_9BACE
2-isopropylmalate synthase {ECO:0000313|EMBL:EFI08719.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
2-isopropylmalate synthase
L3_098_000M1_scaffold_156_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13825..14268
DNA (444bp) protein (148aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Methylglyoxal synthase n=9 Tax=Bacteroidales RepID=A6LDM7_PARD8
methylglyoxyl synthase
L3_098_000M1_scaffold_156_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14284..15345
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
3-isopropylmalate dehydrogenase n=8 Tax=Parabacteroides RepID=A6LDM6_PARD8
3-isopropylmalate dehydrogenase
L3_098_000M1_scaffold_156_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15478..16299)
DNA (822bp) protein (274aa)
Tetratricopeptide repeat containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRZ5_9BACE
Tetratricopeptide repeat containing protein {ECO:0000313|EMBL:EFI08722.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_098_000M1_scaffold_156_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16458..17303
DNA (846bp) protein (282aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family n=7 Tax=Bacteroidales RepID=D7IRZ6_9BACE
transporter
Putative small-conductance mechanosensitive channel {ECO:0000313|EMBL:EFK61210.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_098_000M1_scaffold_156_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17788..18117
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=D0TGW9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08724.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_098_000M1_scaffold_156_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18384..21038
DNA (2655bp) protein (885aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YYY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84379.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_098_000M1_scaffold_156_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21146..22054)
DNA (909bp) protein (303aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=C7XCC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30393.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
lipoprotein
L3_098_000M1_scaffold_156_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22059..23489
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AQV6_9PORP
Poly A polymerase head domain protein {ECO:0000313|EMBL:KDS65612.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
tRNA nucleotidyltransferase
L3_098_000M1_scaffold_156_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23617..25830)
DNA (2214bp) protein (738aa)
GTP pyrophosphokinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS01_9BACE
RelA/SpoT family protein {ECO:0000313|EMBL:KDS65603.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
GTP pyrophosphokinase
L3_098_000M1_scaffold_156_17
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26007..27527
DNA (1521bp) protein (507aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LDL8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB49502.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_098_000M1_scaffold_156_18
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27576..28889)
DNA (1314bp) protein (438aa)
Tat pathway signal sequence domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGW3_9BACE
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEY82367.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
NADH-dependent dyhydrogenase
L3_098_000M1_scaffold_156_19
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29165..30454)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UII5_TANFA
Uncharacterized protein {ECO:0000313|EMBL:BAR51284.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
hypothetical protein
L3_098_000M1_scaffold_156_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30487..30870)
DNA (384bp) protein (128aa)
Putative lipoprotein {ECO:0000313|EMBL:KDS49988.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_098_000M1_scaffold_156_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30874..31599)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UII7_TANFA
Uncharacterized protein {ECO:0000313|EMBL:KDS50003.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_098_000M1_scaffold_156_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32082..33176
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BQG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30398.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_098_000M1_scaffold_156_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33190..33972
DNA (783bp) protein (261aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7XCC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28721.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_098_000M1_scaffold_156_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34123..35571
DNA (1449bp) protein (483aa)
Putative NADH-dependent dyhydrogenase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LDL4_PARD8
NADH-dependent dyhydrogenase
Uncharacterized protein {ECO:0000313|EMBL:KEJ84387.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_098_000M1_scaffold_156_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35595..36599
DNA (1005bp) protein (335aa)
Sugar phosphate isomerase/epimerase n=3 Tax=Parabacteroides RepID=A6LDL3_PARD8
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ABR43777.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_000M1_scaffold_156_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36731..39970
DNA (3240bp) protein (1080aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS08_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08735.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_098_000M1_scaffold_156_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39974..40234
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS09_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08736.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_098_000M1_scaffold_156_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40231..40881)
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=A6LDL0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43774.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_000M1_scaffold_156_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41029..41886
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC-type n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS11_9BACE
Transcriptional regulator, AraC-type {ECO:0000313|EMBL:EFI08738.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
AraC family transcriptional regulator
L3_098_000M1_scaffold_156_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42003..42872)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AN76_9PORP
Putative general stress domain protein {ECO:0000313|EMBL:KDS58138.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
general stress protein
Displaying items 1-30 of 54 in total

View Taxonomy