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L3_098_000M1_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_189_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

203..646
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67865.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_098_000M1_scaffold_189_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(797..1414)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U9L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67866.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_098_000M1_scaffold_189_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1356..1613)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7AZE9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67867.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_098_000M1_scaffold_189_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1597..1848)
DNA (252bp) protein (84aa)
Sigma-70 region 4 n=2 Tax=Clostridiales RepID=R5TQ13_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CCZ67868.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA polymerase sigma-70 factor
L3_098_000M1_scaffold_189_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1945..2148)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A7AZF1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45934.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_189_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2255..2962)
DNA (708bp) protein (236aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZA1_9FIRM
L3_098_000M1_scaffold_189_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2968..3993)
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Lachnospiraceae RepID=A7AZF3_RUMGN
L3_098_000M1_scaffold_189_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4009..4914)
DNA (906bp) protein (302aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=2 Tax=Lachnospiraceae RepID=A7AZF4_RUMGN
L3_098_000M1_scaffold_189_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4916..5149)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A7AZF5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45938.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_189_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5280..6470)
DNA (1191bp) protein (397aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EDN78817.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EDN78817.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZF6_RUMGN
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_098_000M1_scaffold_189_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6546..6974)
DNA (429bp) protein (143aa)
Hydrolase, P-loop family n=3 Tax=Lachnospiraceae RepID=A7AZF7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45940.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical nucleotide-binding protein
L3_098_000M1_scaffold_189_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7081..8259)
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=2 Tax=Lachnospiraceae RepID=A7AZF9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45941.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_189_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8292..9005)
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=3 Tax=Lachnospiraceae RepID=A7AZG0_RUMGN
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EDN78821.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
IMP cyclohydrolase-like protein.
L3_098_000M1_scaffold_189_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9137..10468)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZG1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78822.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
CBS/transporter associated domain-containing protein
L3_098_000M1_scaffold_189_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10535..11926)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZG2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78823.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_189_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11964..12362)
DNA (399bp) protein (133aa)
Transcriptional regulator, GntR family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZG3_RUMGN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDN78824.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
GntR family transcriptional regulator
L3_098_000M1_scaffold_189_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12383..12616)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZG4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45946.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_189_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12710..13705)
DNA (996bp) protein (332aa)
L-asparaginase, type II {ECO:0000313|EMBL:EDN78826.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EDN78826.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L-asparaginase, type II n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZG5_RUMGN
ans; asparaginase
L3_098_000M1_scaffold_189_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13800..14162)
DNA (363bp) protein (121aa)
Ferric reductase like transmembrane component n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZG6_RUMGN
Ferric reductase like transmembrane component {ECO:0000313|EMBL:EDN78827.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_189_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14303..15262)
DNA (960bp) protein (320aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Biotin synthase n=2 Tax=Clostridiales RepID=R5TX22_9FIRM
biotin synthetase
L3_098_000M1_scaffold_189_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15330..15545)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZG8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78830.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_189_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15579..15806
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZG9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78829.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
two-component sensor histidine kinase
L3_098_000M1_scaffold_189_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15873..17063)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TQ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45781.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
XRE family transcriptional regulator
L3_098_000M1_scaffold_189_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17248..18492
DNA (1245bp) protein (415aa)
Transporter, major facilitator family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH1_RUMGN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN78832.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
major facilitator transporter
L3_098_000M1_scaffold_189_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18523..19332)
DNA (810bp) protein (270aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridiales RepID=A7AZH2_RUMGN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDN78833.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
oxidoreductase
L3_098_000M1_scaffold_189_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19449..20480)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78834.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_189_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20490..21386)
DNA (897bp) protein (299aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH4_RUMGN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN78835.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Thioredoxin reductase
L3_098_000M1_scaffold_189_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21548..22438
DNA (891bp) protein (297aa)
LysR substrate binding domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH5_RUMGN
LysR substrate binding domain protein {ECO:0000313|EMBL:EDN78836.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LysR family transcriptional regulator
L3_098_000M1_scaffold_189_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22645..22881)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78838.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_189_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22906..23241)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZH8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78839.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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