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L3_098_000M1_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_208_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..1089
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z6D0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11129.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
putative secreted peptidase
L3_098_000M1_scaffold_208_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1103..2023)
DNA (921bp) protein (307aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides RepID=B7B772_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEC97731.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
AraC family transcriptional regulator
L3_098_000M1_scaffold_208_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2221..5379
DNA (3159bp) protein (1053aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides RepID=K5YCH7_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN11127.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
TonB-dependent receptor plug
L3_098_000M1_scaffold_208_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5392..7233
DNA (1842bp) protein (614aa)
SusD family protein n=3 Tax=Parabacteroides RepID=B7B774_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11126.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RagB/SusD domain protein
L3_098_000M1_scaffold_208_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7306..8991)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B775_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC97734.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L3_098_000M1_scaffold_208_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9005..10432)
DNA (1428bp) protein (476aa)
WD40-like protein n=3 Tax=Parabacteroides RepID=B7B776_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11124.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_208_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10595..12076
DNA (1482bp) protein (494aa)
Polygalacturonase (Pectinase) n=2 Tax=Parabacteroides RepID=B7B777_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78277.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
glycoside hydrolase
L3_098_000M1_scaffold_208_8
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12135..12887
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7B778_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78278.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_098_000M1_scaffold_208_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12903..15785
DNA (2883bp) protein (961aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZI24_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11121.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Tat pathway signal sequence domain-containing protein
L3_098_000M1_scaffold_208_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15822..17291
DNA (1470bp) protein (490aa)
Polygalacturonase (Pectinase) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B781_9PORP
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EEC97688.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_098_000M1_scaffold_208_11
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17713..19365)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7B784_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78281.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L3_098_000M1_scaffold_208_12
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19380..21701)
DNA (2322bp) protein (774aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DNG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78282.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
glycoside hydrolase
L3_098_000M1_scaffold_208_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22015..23706)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B787_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC97694.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_098_000M1_scaffold_208_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23949..25604)
DNA (1656bp) protein (552aa)
Trypsin n=2 Tax=Parabacteroides RepID=B7B788_9PORP
Trypsin {ECO:0000313|EMBL:EEC97695.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
lysyl endopeptidase
L3_098_000M1_scaffold_208_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25732..26169
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11115.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_208_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26197..27039
DNA (843bp) protein (281aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B790_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11114.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_208_17
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27242..27775)
DNA (534bp) protein (178aa)
Alpha-ribazole phosphatase n=2 Tax=Parabacteroides RepID=B7B792_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78287.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
phosphoglycerate mutase
L3_098_000M1_scaffold_208_18
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27788..28540)
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Cobalamin synthase n=3 Tax=Parabacteroides RepID=B7B793_9PORP
cobalamin 5'-phosphate synthase
L3_098_000M1_scaffold_208_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28566..29603)
DNA (1038bp) protein (346aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZI10_9PORP
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_098_000M1_scaffold_208_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29619..30134)
DNA (516bp) protein (172aa)
Adenosylcobinamide kinase/adenosylcobinamidephosphate guanylyltransferase n=3 Tax=Parabacteroides RepID=B7B795_9PORP
Adenosylcobinamide kinase/adenosylcobinamidephosphate guanylyltransferase {ECO:0000313|EMBL:EEC97702.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
cobinamide kinase
L3_098_000M1_scaffold_208_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30139..30744)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z6A8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11109.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
pseudouridine synthase
L3_098_000M1_scaffold_208_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30760..31773)
DNA (1014bp) protein (338aa)
Cobalamin biosynthesis protein CobD n=3 Tax=Parabacteroides RepID=B7B797_9PORP
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
cobalamin biosynthesis protein CbiB
L3_098_000M1_scaffold_208_23
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31770..33056)
DNA (1287bp) protein (429aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=B7B798_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78293.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
two-component system sensor histidine kinase
L3_098_000M1_scaffold_208_24
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33069..33779)
DNA (711bp) protein (237aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZI05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78294.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
transcriptional regulator
L3_098_000M1_scaffold_208_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33926..35566
DNA (1641bp) protein (547aa)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=2 Tax=Parabacteroides johnsonii RepID=B7B7A0_9PORP
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:EKN11105.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
anaerobic fumarate hydratase class I
L3_098_000M1_scaffold_208_26
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35723..35851
DNA (129bp) protein (43aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B7A1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78296.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L3_098_000M1_scaffold_208_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35975..36109
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A5Z5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11103.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_098_000M1_scaffold_208_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36480..38711)
DNA (2232bp) protein (744aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Polyribonucleotide nucleotidyltransferase n=2 Tax=Parabacteroides RepID=B7B7A4_9PORP
polynucleotide phosphorylase
L3_098_000M1_scaffold_208_29
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38907..40067
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZI00_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77444.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_098_000M1_scaffold_208_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40300..40770
DNA (471bp) protein (157aa)
Transcription elongation factor GreA n=3 Tax=Parabacteroides RepID=B7B7A7_9PORP
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transcription elongation factor GreA
Displaying items 1-30 of 43 in total

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