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L3_098_000M1_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_225_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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427..843
DNA (417bp) protein (139aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=5 Tax=Clostridiales RepID=D4MXF4_9FIRM
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Uncharacterized protein {ECO:0000313|EMBL:EKY21082.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_225_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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853..1446
DNA (594bp) protein (198aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=5 Tax=Clostridiales RepID=D4MXF5_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Flavin reductase-like protein {ECO:0000313|EMBL:EKY21081.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_225_3
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1430..1933
DNA (504bp) protein (168aa)
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Shikimate kinase n=5 Tax=Clostridiales RepID=D4MXF6_9FIRM
L3_098_000M1_scaffold_225_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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2032..3327
DNA (1296bp) protein (432aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Lachnospiraceae RepID=E5VLK0_9FIRM
L3_098_000M1_scaffold_225_5
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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3344..3982
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P282_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31430.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_225_6
unknown

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4059..5240
DNA (1182bp) protein (394aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541, ECO:0000313|EMBL:CBL37304.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
S-adenosylmethionine synthase n=4 Tax=Clostridiales RepID=D4MXF9_9FIRM
L3_098_000M1_scaffold_225_7
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5279..6826
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium sp. SS2/1 RepID=B0P280_9CLOT
L3_098_000M1_scaffold_225_8
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7415..7594
DNA (180bp) protein (60aa)
Eco57I restriction endonuclease n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESX7_9FIRM
Eco57I restriction endonuclease {ECO:0000313|EMBL:EEG37719.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L3_098_000M1_scaffold_225_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7595..9190
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RF55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31517.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_098_000M1_scaffold_225_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9666..10700)
DNA (1035bp) protein (345aa)
Archaeal ATPase n=4 Tax=Clostridiales RepID=D4MY23_9FIRM
Archaeal ATPase.
Uncharacterized protein {ECO:0000313|EMBL:EFV16248.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_098_000M1_scaffold_225_11
unknown

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10891..11850
DNA (960bp) protein (320aa)
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776, ECO:0000313|EMBL:CBL37519.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
2-dehydropantoate 2-reductase n=2 Tax=Clostridiales RepID=D4MY24_9FIRM
L3_098_000M1_scaffold_225_12
unknown

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11874..13325
DNA (1452bp) protein (484aa)
Diguanylate cyclase (GGDEF) domain n=2 Tax=Clostridiales RepID=D4MY25_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL37520.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_225_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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13504..14019
DNA (516bp) protein (172aa)
Mannitol/fructose-specific phosphotransferase system, IIA domain (EC:2.7.1.69)
Mannitol-specific phosphotransferase enzyme IIA component family protein n=2 Tax=Lachnospiraceae RepID=L1Q6E0_9FIRM
Mannitol-specific phosphotransferase enzyme IIA component family protein {ECO:0000313|EMBL:EKY23177.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_225_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14150..15034)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY23176.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted membrane protein
L3_098_000M1_scaffold_225_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15059..17461)
DNA (2403bp) protein (801aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Endonuclease MutS2 n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z901_9FIRM
MutS2 family protein
L3_098_000M1_scaffold_225_16
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17544..19712
DNA (2169bp) protein (723aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q597_9FIRM
L3_098_000M1_scaffold_225_17
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19872..20813
DNA (942bp) protein (314aa)
Uncharacterized domain HDIG n=4 Tax=Clostridiales RepID=D4MY30_9FIRM
uncharacterized domain HDIG
HDIG domain protein {ECO:0000313|EMBL:EDS21311.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_098_000M1_scaffold_225_18
unknown

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20877..22250
DNA (1374bp) protein (458aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBL37526.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBL37526.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
23S rRNA m(5)U-1939 methyltransferase n=2 Tax=Clostridiales RepID=D4MY31_9FIRM
L3_098_000M1_scaffold_225_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22579..23460)
DNA (882bp) protein (294aa)
HAD-superfamily hydrolase, subfamily IIB n=3 Tax=Clostridiales RepID=D4MY32_9FIRM
HAD-superfamily hydrolase, subfamily IIB
Cof-like hydrolase {ECO:0000313|EMBL:EKY23171.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_225_20
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23562..24434)
DNA (873bp) protein (291aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VHR0_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EFV17669.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Predicted hydrolases of the HAD superfamily
L3_098_000M1_scaffold_225_21
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24621..25328
DNA (708bp) protein (236aa)
exonuclease, DNA polymerase III, epsilon subunit family (EC:2.7.7.7)
Exonuclease n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VHQ9_9FIRM
Exonuclease {ECO:0000313|EMBL:EFV17668.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_098_000M1_scaffold_225_22
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25450..26946
DNA (1497bp) protein (499aa)
VanW like protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VHQ8_9FIRM
VanW like protein {ECO:0000313|EMBL:EFV17667.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Uncharacterized vancomycin resistance protein
L3_098_000M1_scaffold_225_23
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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26949..27947
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VHQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17666.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Hydrogenase maturation factor
L3_098_000M1_scaffold_225_24
unknown

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27977..28471
DNA (495bp) protein (165aa)
Transcriptional regulators n=5 Tax=Clostridiales RepID=D4MY38_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL37533.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_225_25
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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28471..29640
DNA (1170bp) protein (390aa)
Aminotransferase class I and II n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VHQ5_9FIRM
Aminotransferase class I and II {ECO:0000313|EMBL:EFV17664.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Aspartate/tyrosine/aromatic aminotransferase
L3_098_000M1_scaffold_225_26
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29671..30168
DNA (498bp) protein (166aa)
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=5 Tax=Clostridiales RepID=D4MY40_9FIRM
L3_098_000M1_scaffold_225_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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30359..32992
DNA (2634bp) protein (878aa)
Sigma-54 interaction domain-containing protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z4L1_9FIRM
Sigma-54 interaction domain-containing protein {ECO:0000313|EMBL:CDA31599.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PTS system transcriptional activator
L3_098_000M1_scaffold_225_28
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33108..33578
DNA (471bp) protein (157aa)
PTS system fructose IIA component n=2 Tax=Lachnospiraceae RepID=L1Q6C4_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:EKY23162.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system mannose/fructose/sorbose transporter subunit IIA
L3_098_000M1_scaffold_225_29
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33545..34060
DNA (516bp) protein (172aa)
PTS system sorbose subfamily IIB component n=3 Tax=Lachnospiraceae RepID=L1Q5I9_9FIRM
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EKY23161.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system transporter subunit IIB
L3_098_000M1_scaffold_225_30
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34079..34843
DNA (765bp) protein (255aa)
PTS system sorbose-specific iic component n=3 Tax=Lachnospiraceae RepID=E5VHQ0_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EKY23160.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system transporter subunit IIC
Displaying items 1-30 of 44 in total

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