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L3_098_000M1_scaffold_234

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_234_1
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75..644)
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5BUU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58244.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
signal transduction histidine kinase LytS
L3_098_000M1_scaffold_234_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(661..2259)
DNA (1599bp) protein (533aa)
Response regulator receiver domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C278_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG73732.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_098_000M1_scaffold_234_3
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2491..2718)
DNA (228bp) protein (76aa)
Hsp20/alpha crystallin family protein n=2 Tax=Clostridiales RepID=A5ZU37_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDD86650.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
Molecular chaperone (small heat shock protein)
L3_098_000M1_scaffold_234_4
unknown

Not on your lists

comp(2844..2954)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_098_000M1_scaffold_234_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2903..3283)
DNA (381bp) protein (127aa)
Bacterial mobilization protein MobC n=3 Tax=Lachnospiraceae RepID=A7B033_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44329.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_234_6
unknown

Not on your lists

comp(3431..3763)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00035DD9DD
L3_098_000M1_scaffold_234_7
unknown

Not on your lists

comp(3814..3948)
DNA (135bp) protein (45aa)
hypothetical protein
L3_098_000M1_scaffold_234_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4075..4527)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89927.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L3_098_000M1_scaffold_234_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4524..5468)
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=root RepID=B0G6T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46849.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
plasmid segregation actin-type ATPase ParM
L3_098_000M1_scaffold_234_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5720..6034)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FD3D8D
Uncharacterized protein {ECO:0000313|EMBL:EGX70352.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_098_000M1_scaffold_234_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6114..7070)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70351.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ORF6N domain.
L3_098_000M1_scaffold_234_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7247..7594)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90A5 RepID=R0C9H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDR46847.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_098_000M1_scaffold_234_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7795..9000)
DNA (1206bp) protein (402aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LPY4_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL22842.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_098_000M1_scaffold_234_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9181..10512)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QSM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41752.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted ATPase (AAA+ superfamily)
L3_098_000M1_scaffold_234_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10885..12459)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80540.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
response regulator
L3_098_000M1_scaffold_234_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12437..14212)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80538.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_098_000M1_scaffold_234_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14289..15137)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80536.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
beta-lactamase domain-containing protein
L3_098_000M1_scaffold_234_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15158..15988)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80534.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sugar ABC transporter permease
L3_098_000M1_scaffold_234_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15990..16874)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80533.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
binding-protein-dependent transport systems inner membrane component
L3_098_000M1_scaffold_234_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16962..18221)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80532.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type sugar transport system, periplasmic component
L3_098_000M1_scaffold_234_21
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18481..19530)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70833.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_098_000M1_scaffold_234_22
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19688..20035)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46847.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_098_000M1_scaffold_234_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20374..21258
DNA (885bp) protein (295aa)
Aldose 1-epimerase n=2 Tax=Roseburia RepID=C0FW75_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EEG93239.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
aldose 1-epimerase
L3_098_000M1_scaffold_234_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21263..21877)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FW73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93237.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
uridine kinase
L3_098_000M1_scaffold_234_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21868..22407)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30233.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_098_000M1_scaffold_234_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22544..24031)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93465.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Uncharacterized conserved protein (DUF2088).
L3_098_000M1_scaffold_234_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24058..24996)
DNA (939bp) protein (313aa)
Triosephosphate isomerase (EC:5.3.1.1)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30216.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_098_000M1_scaffold_234_28
Catellicoccus marimammalium, Catellicoccus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24993..25763)
DNA (771bp) protein (257aa)
Transport protein n=1 Tax=Catellicoccus marimammalium M35/04/3 RepID=K8Z7E5_9ENTE
Transport protein {ECO:0000313|EMBL:EKU26934.1}; TaxID=1234409 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Catellicoccus.;" source="Catellicoccus marimammalium M35/04/3.;"
hypothetical protein
L3_098_000M1_scaffold_234_29
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25729..26883)
DNA (1155bp) protein (385aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBK80128.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBK80128.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Fructose-bisphosphate aldolase n=1 Tax=Coprococcus catus GD/7 RepID=D4J707_9FIRM
L3_098_000M1_scaffold_234_30
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26896..28044)
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBT9_BLAHA
Displaying items 1-30 of 52 in total

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