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L3_098_000M1_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_259_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

649..1497
DNA (849bp) protein (283aa)
Uncharacterized conserved protein n=4 Tax=Clostridiales RepID=D4MUX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV15741.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_098_000M1_scaffold_259_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1494..2321
DNA (828bp) protein (276aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=5 Tax=Clostridiales RepID=D4MUX9_9FIRM
L3_098_000M1_scaffold_259_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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2400..3242
DNA (843bp) protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z8N1_9FIRM
L3_098_000M1_scaffold_259_4
unknown

Not on your lists

3261..3650
DNA (390bp) protein (130aa)
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Aspartate 1-decarboxylase n=5 Tax=Clostridiales RepID=D4MUY1_9FIRM
L3_098_000M1_scaffold_259_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3661..4851
DNA (1191bp) protein (397aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EDS20526.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDS20526.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EDS20526.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=4 Tax=Clostridiales RepID=B0P5C3_9CLOT
L3_098_000M1_scaffold_259_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4934..6421
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Hsp90-like protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZVN8_9FIRM
Signal transduction histidine kinase
L3_098_000M1_scaffold_259_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6423..7112
DNA (690bp) protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=5 Tax=Clostridiales RepID=D4MUY4_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:EKY21380.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_259_8
unknown

Not on your lists

7122..7832
DNA (711bp) protein (237aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CBL39201.1}; EC=5.4.99.- {ECO:0000313|EMBL:CBL39201.1};; EC=5.4.99.12 {ECO:0000313|EMBL:CBL39201.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Ribosomal large subunit pseudouridine synthase D n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MUY5_9FIRM
L3_098_000M1_scaffold_259_9
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7853..8647
DNA (795bp) protein (265aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase n=4 Tax=Clostridiales RepID=B0P5C7_9CLOT
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:EFV15732.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_098_000M1_scaffold_259_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8677..9171
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P5C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFV15731.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_098_000M1_scaffold_259_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9262..9750)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=L1Q069_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21384.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_098_000M1_scaffold_259_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9783..10517)
DNA (735bp) protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases n=3 Tax=Clostridiales RepID=D4MUY9_9FIRM
L3_098_000M1_scaffold_259_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10544..11998)
DNA (1455bp) protein (485aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=2 Tax=Lachnospiraceae RepID=E5VN62_9FIRM
L3_098_000M1_scaffold_259_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12095..12355)
DNA (261bp) protein (87aa)
Phosphocarrier, HPr family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q194_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EKY21387.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Phosphotransferase System HPr (HPr) Family
L3_098_000M1_scaffold_259_15
unknown

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12429..13361
DNA (933bp) protein (311aa)
SpoIID/LytB domain n=2 Tax=Clostridiales RepID=D4MUZ2_9FIRM
SpoIID/LytB domain
SpoIID/LytB domain {ECO:0000313|EMBL:CBL39208.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_259_16
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13354..14088
DNA (735bp) protein (245aa)
Membrane-bound metallopeptidase n=3 Tax=Clostridiales RepID=D4MUZ3_9FIRM
Membrane-bound metallopeptidase
Peptidase, M23 family {ECO:0000313|EMBL:EKY21389.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_259_17
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14228..14503
DNA (276bp) protein (92aa)
Predicted endonuclease containing a URI domain n=5 Tax=Clostridiales RepID=D4MUZ4_9FIRM
Predicted endonuclease containing a URI domain
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EDS20538.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_098_000M1_scaffold_259_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14486..15190)
DNA (705bp) protein (235aa)
Channel protein, hemolysin III family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q0H8_9FIRM
Channel protein, hemolysin III family {ECO:0000313|EMBL:EKY21391.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
channel protein, hemolysin III family
L3_098_000M1_scaffold_259_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15319..16008
DNA (690bp) protein (230aa)
FCD domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q199_9FIRM
FCD domain protein {ECO:0000313|EMBL:EKY21392.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
transcriptional regulator, GntR family
L3_098_000M1_scaffold_259_20
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16255..17043
DNA (789bp) protein (263aa)
Electron transfer flavoprotein, beta subunit n=6 Tax=Firmicutes RepID=D4MUZ7_9FIRM
Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein domain-containing protein {ECO:0000313|EMBL:CDA33116.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_259_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17053..18252
DNA (1200bp) protein (400aa)
Electron transfer flavoprotein domain-containing protein n=3 Tax=Lachnospiraceae RepID=E5VN54_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EKY21394.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Electron transfer flavoprotein, alpha subunit
L3_098_000M1_scaffold_259_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18258..19661
DNA (1404bp) protein (468aa)
FAD/FMN-containing dehydrogenases (EC:1.1.3.15)
FAD/FMN-containing dehydrogenases n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z0A6_9FIRM
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:CDA33118.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_259_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19850..20245
DNA (396bp) protein (132aa)
Fe2+/Zn2+ uptake regulation proteins n=5 Tax=Clostridiales RepID=D4MV00_9FIRM
Fe2+/Zn2+ uptake regulation proteins
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EKY21396.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_259_24
unknown

Not on your lists

20378..20923
DNA (546bp) protein (182aa)
Rubrerythrin n=5 Tax=Clostridiales RepID=D4MV01_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBL39217.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_259_25
unknown

Not on your lists

21023..21478
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P5E3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39218.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_259_26
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21456..22454
DNA (999bp) protein (333aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P5E4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS20547.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_098_000M1_scaffold_259_27
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22451..23329
DNA (879bp) protein (293aa)
TIGR00159 family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q140_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:EKY21400.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_098_000M1_scaffold_259_28
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23307..24530
DNA (1224bp) protein (408aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Clostridiales RepID=D4MV04_9FIRM
hypothetical protein
YbbR-like protein {ECO:0000313|EMBL:EKY21401.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_259_29
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24553..25482
DNA (930bp) protein (310aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1A5_9FIRM
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EKY21402.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Glycosyltransferases involved in cell wall biogenesis
L3_098_000M1_scaffold_259_30
unknown

Not on your lists

comp(25550..25966)
DNA (417bp) protein (139aa)
Predicted membrane protein n=3 Tax=Clostridiales RepID=D4MV06_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL39222.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Displaying items 1-30 of 84 in total

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