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L3_098_000M1_scaffold_274

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_274_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(206..622)
DNA (417bp) protein (139aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=3 Tax=Lachnospiraceae RepID=A7B2J9_RUMGN
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_098_000M1_scaffold_274_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(634..2028)
DNA (1395bp) protein (465aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=2 Tax=Lachnospiraceae RepID=F7K0R1_9FIRM
L3_098_000M1_scaffold_274_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2038..2931)
DNA (894bp) protein (298aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=3 Tax=Lachnospiraceae RepID=A7B2K1_RUMGN
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_098_000M1_scaffold_274_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2933..4441)
DNA (1509bp) protein (503aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATP synthase subunit alpha n=2 Tax=Lachnospiraceae RepID=F7K0R3_9FIRM
ATP synthase F1 subunit alpha
L3_098_000M1_scaffold_274_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4447..4983)
DNA (537bp) protein (179aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Lachnospiraceae RepID=F7K0R4_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_274_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4961..5458)
DNA (498bp) protein (166aa)
ATP synthase subunit b n=2 Tax=Lachnospiraceae RepID=F7K0R5_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATP synthase F0 subunit B
L3_098_000M1_scaffold_274_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5494..5718)
DNA (225bp) protein (75aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit n=4 Tax=Clostridiales RepID=A7B2K5_RUMGN
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_098_000M1_scaffold_274_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5766..6422)
DNA (657bp) protein (219aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=4 Tax=Clostridiales RepID=A7B2K6_RUMGN
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_098_000M1_scaffold_274_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6749..6940)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2K8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77807.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_274_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6958..7857)
DNA (900bp) protein (300aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B2K9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44489.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_274_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8000..9499)
DNA (1500bp) protein (500aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BMD2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44490.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_274_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9830..10378
DNA (549bp) protein (183aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B2L2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44491.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted metal-dependent hydrolase
L3_098_000M1_scaffold_274_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10576..10767)
DNA (192bp) protein (64aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TLX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44492.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_274_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10769..11350)
DNA (582bp) protein (194aa)
Maf-like protein HMPREF0991_02990 n=2 Tax=Lachnospiraceae RepID=F7K0S2_9FIRM
Maf-like protein HMPREF1201_02984 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
MAF protein
L3_098_000M1_scaffold_274_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11499..12086
DNA (588bp) protein (196aa)
HD domain protein n=4 Tax=Clostridiales RepID=A7B2L5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44494.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted hydrolases of HD superfamily
L3_098_000M1_scaffold_274_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12083..12862
DNA (780bp) protein (260aa)
UPF0246 protein HMPREF0991_02992 n=3 Tax=Clostridiales RepID=F7K0S4_9FIRM
UPF0246 protein HMPREF0991_02992 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_274_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12870..13328)
DNA (459bp) protein (153aa)
Copper/zinc superoxide dismutase n=3 Tax=Lachnospiraceae RepID=A7B2L7_RUMGN
Copper/zinc superoxide dismutase {ECO:0000313|EMBL:EGN44496.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Cu/Zn superoxide dismutase
L3_098_000M1_scaffold_274_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13372..15480)
DNA (2109bp) protein (703aa)
abgB2; p-aminobenzoyl-glutamate hydrolase subunit B (EC:3.5.1.-)
Amidohydrolase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2L8_RUMGN
Amidohydrolase {ECO:0000313|EMBL:EDN77817.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_274_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15673..16812
DNA (1140bp) protein (380aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=3 Tax=Lachnospiraceae RepID=A7B2M0_RUMGN
L3_098_000M1_scaffold_274_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16814..17929
DNA (1116bp) protein (372aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EDN77820.1}; EC=2.7.7.27 {ECO:0000313|EMBL:EDN77820.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=3 Tax=Lachnospiraceae RepID=A7B2M1_RUMGN
L3_098_000M1_scaffold_274_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18091..19140)
DNA (1050bp) protein (350aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=2 Tax=Lachnospiraceae RepID=A7B2M2_RUMGN
L3_098_000M1_scaffold_274_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19234..20547)
DNA (1314bp) protein (438aa)
Putative sensor histidine kinase VirS n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2M3_RUMGN
Putative sensor histidine kinase VirS {ECO:0000313|EMBL:EDN77822.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_274_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20548..21270)
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2M4_RUMGN
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN77823.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Response regulator of the LytR/AlgR family
L3_098_000M1_scaffold_274_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21381..21818)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2M5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77824.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_274_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21832..24942)
DNA (3111bp) protein (1037aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2M6_RUMGN
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EDN77825.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_274_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24965..26674)
DNA (1710bp) protein (570aa)
Transporter, major facilitator family protein n=2 Tax=Ruminococcus gnavus RepID=A7B2M7_RUMGN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN77826.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Na+/melibiose symporter and related transporters
L3_098_000M1_scaffold_274_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26652..29237)
DNA (2586bp) protein (862aa)
Alpha-L-rhamnosidase N-terminal domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2M8_RUMGN
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EDN77827.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
alpha-L-rhamnosidase
L3_098_000M1_scaffold_274_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29231..31648)
DNA (2418bp) protein (806aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B2M9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44507.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_274_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32056..32733)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2N1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77830.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_274_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32730..33938)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2N2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77831.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
abortive infection protein, putative
Displaying items 1-30 of 44 in total

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