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L3_098_000M1_scaffold_283

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_283_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..620)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RIH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60286.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_098_000M1_scaffold_283_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(672..1607)
DNA (936bp) protein (312aa)
DNA polymerase III, delta' subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFS8_9FIRM
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EGJ45789.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA polymerase III subunit gamma and tau
L3_098_000M1_scaffold_283_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1640..2941)
DNA (1302bp) protein (434aa)
Arginine decarboxylase (EC:4.1.1.19)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45790.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_098_000M1_scaffold_283_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3022..3864)
DNA (843bp) protein (281aa)
SpoIIIJ-associated protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGF9_9FIRM
SpoIIIJ-associated protein {ECO:0000313|EMBL:EGJ45763.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Jag protein homolog
L3_098_000M1_scaffold_283_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3867..5360)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5S065_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60283.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_098_000M1_scaffold_283_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5401..5619)
DNA (219bp) protein (73aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG2_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_098_000M1_scaffold_283_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5616..5969)
DNA (354bp) protein (118aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rnpA; ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG3_9FIRM
L3_098_000M1_scaffold_283_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6514..6648)
DNA (135bp) protein (45aa)
Ribosomal protein L34 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG4_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
50S ribosomal protein L34
L3_098_000M1_scaffold_283_9
unknown

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comp(6949..7197)
DNA (249bp) protein (83aa)

This feature has no annotations

L3_098_000M1_scaffold_283_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7218..8534
DNA (1317bp) protein (439aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RY41_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaA; chromosomal replication initiator protein DnaA
L3_098_000M1_scaffold_283_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8859..9965
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG7_9FIRM
L3_098_000M1_scaffold_283_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10057..10272
DNA (216bp) protein (72aa)
Ribosome-associated protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG8_9FIRM
Ribosome-associated protein {ECO:0000313|EMBL:EGJ45772.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_098_000M1_scaffold_283_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10269..11372
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGG9_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
recF; DNA replication and repair protein RecF
L3_098_000M1_scaffold_283_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11437..11739
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45774.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_098_000M1_scaffold_283_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11802..12065
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45775.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_098_000M1_scaffold_283_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

12192..14135
DNA (1944bp) protein (648aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZK46_9FIRM
L3_098_000M1_scaffold_283_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists


14235..16802
DNA (2568bp) protein (856aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YII1_9FIRM
L3_098_000M1_scaffold_283_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

16841..17299
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZK50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15020.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
conserved hypothetical protein
L3_098_000M1_scaffold_283_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18023..18460
DNA (438bp) protein (146aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGH6_9FIRM
L3_098_000M1_scaffold_283_20
unknown

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18606..18914
DNA (309bp) protein (103aa)

This feature has no annotations

L3_098_000M1_scaffold_283_21
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists


18868..20289
DNA (1422bp) protein (474aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XY07_9FIRM
L3_098_000M1_scaffold_283_22
unknown

Not on your lists

comp(20351..20536)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_098_000M1_scaffold_283_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20673..21029
DNA (357bp) protein (119aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2PZX6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK64766.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Helix-turn-helix.
L3_098_000M1_scaffold_283_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22650..24479
DNA (1830bp) protein (610aa)
GTP-binding protein TypA/BipA n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RUQ1_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EQN60287.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
typA; GTP-binding protein TypA
L3_098_000M1_scaffold_283_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24714..25328)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45815.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_098_000M1_scaffold_283_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25580..25930
DNA (351bp) protein (117aa)
Transcriptional regulator, PadR family n=3 Tax=Clostridiales RepID=G9YSI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33497.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
PadR family transcriptional regulator
L3_098_000M1_scaffold_283_27
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26041..26307
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIP7_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43910.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000M1_scaffold_283_28
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26327..27127
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIP7_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43910.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000M1_scaffold_283_29
unknown

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27124..27876
DNA (753bp) protein (251aa)

This feature has no annotations

L3_098_000M1_scaffold_283_30
unknown

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27861..28664
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIP7_CLOPH
hypothetical protein
Displaying items 1-30 of 65 in total

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