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L3_098_000M1_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_286_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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368..622
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNE2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49070.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_286_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

640..942
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNE2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49070.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_286_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1024..1410
DNA (387bp) protein (129aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B750_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66871.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_098_000M1_scaffold_286_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1586..2131
DNA (546bp) protein (182aa)
Stage V sporulation protein T n=4 Tax=Clostridiales RepID=A7B749_RUMGN
Stage V sporulation protein T {ECO:0000313|EMBL:EGN49068.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, AbrB family
L3_098_000M1_scaffold_286_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2215..2358
DNA (144bp) protein (48aa)
RSAM-modified six-cysteine peptide n=4 Tax=Clostridiales RepID=A7B748_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49067.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_286_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2455..3876
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66868.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_098_000M1_scaffold_286_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3863..6136
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UD77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66867.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
protein translocase subunit secF/protein translocase subunit secD
L3_098_000M1_scaffold_286_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6295..11640
DNA (5346bp) protein (1782aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BP78_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16291.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
cell wall surface anchor family protein
L3_098_000M1_scaffold_286_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11923..13635
DNA (1713bp) protein (571aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDN76305.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDN76305.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B743_RUMGN
L3_098_000M1_scaffold_286_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13692..15998
DNA (2307bp) protein (769aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Lachnospiraceae RepID=A7B742_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16289.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_098_000M1_scaffold_286_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16005..16625
DNA (621bp) protein (207aa)
Metallo-beta-lactamase domain protein n=3 Tax=Lachnospiraceae RepID=A7B741_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16288.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Zn-dependent hydrolases, including glyoxylases
L3_098_000M1_scaffold_286_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16643..18073
DNA (1431bp) protein (477aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=2 Tax=Lachnospiraceae RepID=V8BND0_RUMGN
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:ETD16287.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_098_000M1_scaffold_286_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18064..19329
DNA (1266bp) protein (422aa)
Histidine--tRNA ligase {ECO:0000313|EMBL:EDN76301.1}; EC=6.1.1.21 {ECO:0000313|EMBL:EDN76301.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B739_RUMGN
L3_098_000M1_scaffold_286_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19352..21151
DNA (1800bp) protein (600aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Lachnospiraceae RepID=F7JVL3_9FIRM
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ETD16285.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_098_000M1_scaffold_286_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21736..22791
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B735_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76297.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_286_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22924..24207
DNA (1284bp) protein (428aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=2 Tax=Clostridiales RepID=A7B734_RUMGN
L3_098_000M1_scaffold_286_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24223..25071
DNA (849bp) protein (283aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Thymidylate synthase n=2 Tax=Lachnospiraceae RepID=F7JVG5_9FIRM
ThyA; thymidylate synthase
L3_098_000M1_scaffold_286_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25101..25592
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=3 Tax=Clostridiales RepID=F7JVG4_9FIRM
L3_098_000M1_scaffold_286_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25549..26631
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BN94_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49053.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_098_000M1_scaffold_286_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26631..27341
DNA (711bp) protein (237aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B730_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49052.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_286_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27334..28164
DNA (831bp) protein (277aa)
ABC 3 transport family protein n=3 Tax=Clostridiales RepID=A7B729_RUMGN
ABC 3 transport family protein {ECO:0000313|EMBL:EDN76291.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L3_098_000M1_scaffold_286_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28339..30057
DNA (1719bp) protein (573aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=4 Tax=Clostridiales RepID=A7B728_RUMGN
L3_098_000M1_scaffold_286_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30072..30584
DNA (513bp) protein (171aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=4 Tax=Clostridiales RepID=A7B727_RUMGN
Acetolactate synthase {ECO:0000313|EMBL:EGN49049.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_286_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30681..31706
DNA (1026bp) protein (342aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EDN76288.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EDN76288.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=4 Tax=Clostridiales RepID=A7B726_RUMGN
L3_098_000M1_scaffold_286_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31868..32035
DNA (168bp) protein (56aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B725_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68523.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_098_000M1_scaffold_286_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32331..34052)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNB5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16272.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type multidrug transport system, ATPase and permease components
L3_098_000M1_scaffold_286_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34288..35658
DNA (1371bp) protein (457aa)
MATE efflux family protein n=4 Tax=Clostridiales RepID=A7B721_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49044.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative efflux protein, MATE family
L3_098_000M1_scaffold_286_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35786..38329
DNA (2544bp) protein (848aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BN86_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49043.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_286_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38326..40506
DNA (2181bp) protein (727aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JVF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49042.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_286_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40617..41555
DNA (939bp) protein (313aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
tRNA-dihydrouridine synthase n=4 Tax=Clostridiales RepID=A7B718_RUMGN
tRNA-U20a,U20b-dihydrouridine synthase
Displaying items 1-30 of 35 in total

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