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L3_098_000M1_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_289_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..111)
DNA (111bp) protein (37aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=2 Tax=Oscillibacter RepID=U2PSX8_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:ERK61111.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_098_000M1_scaffold_289_2
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(143..547)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TKH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72755.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_098_000M1_scaffold_289_3
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(583..1743)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TMA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73375.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
conserved hypothetical protein
L3_098_000M1_scaffold_289_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1788..2600)
DNA (813bp) protein (271aa)
ATPase AAA family n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6URG9_9FIRM
ATPase AAA family {ECO:0000313|EMBL:CDC73372.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
ATPase
L3_098_000M1_scaffold_289_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2872..3792)
DNA (921bp) protein (307aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=7 Tax=Clostridium difficile RepID=T3FAQ6_CLODI
LysR family transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EQH99147.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_098_000M1_scaffold_289_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4043..5560
DNA (1518bp) protein (506aa)
Succinyl-CoA:coenzyme A transferase {ECO:0000313|EMBL:CCK87651.1}; EC=2.8.3.- {ECO:0000313|EMBL:CCK87651.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
Succinate CoA transferase n=11 Tax=Clostridium difficile RepID=D5Q2W5_CLODI
cat1; succinyl-CoA:coenzyme A transferase
L3_098_000M1_scaffold_289_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5595..6974
DNA (1380bp) protein (460aa)
Aldehyde-alcohol dehydrogenase domain protein n=8 Tax=Clostridium difficile RepID=G6BCJ5_CLODI
Aldehyde-alcohol dehydrogenase domain protein {ECO:0000313|EMBL:EHJ25157.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
sucD; succinate-semialdehyde dehydrogenase
L3_098_000M1_scaffold_289_8
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7035..7700
DNA (666bp) protein (222aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNE3_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CCZ42785.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Predicted membrane protein
L3_098_000M1_scaffold_289_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7783..8901
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23267.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
4-hydroxybutyrate dehydrogenase
L3_098_000M1_scaffold_289_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8925..10400
DNA (1476bp) protein (492aa)
abfD; gamma-aminobutyrate metabolism dehydratase/isomerase (EC:4.2.1.- 5.3.3.3)
Gamma-aminobutyrate metabolism dehydratase/isomerase n=2 Tax=Oscillibacter RepID=U2QC19_9FIRM
Gamma-aminobutyrate metabolism dehydratase/isomerase {ECO:0000313|EMBL:ERK57494.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_098_000M1_scaffold_289_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10552..10839
DNA (288bp) protein (96aa)
NifU-like protein n=2 Tax=Oscillibacter RepID=U2R6D0_9FIRM
NifU-like protein {ECO:0000313|EMBL:ERK64079.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_098_000M1_scaffold_289_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11143..12405
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27239.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
4-hydroxybutyrate CoA-transferase
L3_098_000M1_scaffold_289_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12476..13306
DNA (831bp) protein (277aa)
hbd; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TFG8_9FIRM
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:CDC68454.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_098_000M1_scaffold_289_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13403..14752
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67321.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_098_000M1_scaffold_289_15
unknown

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15033..15800
DNA (768bp) protein (256aa)

This feature has no annotations

L3_098_000M1_scaffold_289_16
unknown

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15856..16605
DNA (750bp) protein (250aa)

This feature has no annotations

L3_098_000M1_scaffold_289_17
unknown

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16633..17040
DNA (408bp) protein (136aa)

This feature has no annotations

L3_098_000M1_scaffold_289_18
unknown

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17074..17844
DNA (771bp) protein (257aa)

This feature has no annotations

L3_098_000M1_scaffold_289_19
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17864..19078
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JPD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36085.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
outer membrane fibronectin-binding protein
L3_098_000M1_scaffold_289_20
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19628..19900
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RX59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69499.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_098_000M1_scaffold_289_21
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20331..20702
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002DFA8B3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF09447.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_098_000M1_scaffold_289_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20726..21052
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29721.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transposase IS66
L3_098_000M1_scaffold_289_23
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21084..22652
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D91B6A
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:AHF10741.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_098_000M1_scaffold_289_24
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(22932..24140)
DNA (1209bp) protein (403aa)
Putative transposase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D3R3_9FIRM
Putative transposase {ECO:0000313|EMBL:CCX71497.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
IS110, transposase
L3_098_000M1_scaffold_289_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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24991..25806
DNA (816bp) protein (272aa)
Sortase, SrtB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRQ6_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:EFB74597.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_098_000M1_scaffold_289_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26055..26315)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C7J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80008.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_098_000M1_scaffold_289_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26320..28071)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q1H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56600.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
TRAG family protein
L3_098_000M1_scaffold_289_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28086..29012)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QK72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56599.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_098_000M1_scaffold_289_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29092..29763)
DNA (672bp) protein (224aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2B7_9FIRM
nucleotidyltransferase substrate binding protein, HI0074 family
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:CBL00416.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_289_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29879..31711)
DNA (1833bp) protein (611aa)
serine threonine protein phosphatase 5 (EC:3.1.3.16)
Sel1 repeat protein n=2 Tax=Oscillibacter RepID=U2S1A6_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:ERK56597.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Displaying items 1-30 of 52 in total

View Taxonomy