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L3_098_000M1_scaffold_349

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_349_1
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(141..371)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LQ77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB76287.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
transcriptional regulator
L3_098_000M1_scaffold_349_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(569..775)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B476_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77153.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_349_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1091..1774)
DNA (684bp) protein (228aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEG5_9FIRM
mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA
L3_098_000M1_scaffold_349_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1799..2773)
DNA (975bp) protein (325aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDZ8_9FIRM
GTP cyclohydrolase subunit MoaA
L3_098_000M1_scaffold_349_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2984..3802
DNA (819bp) protein (273aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDZ9_9FIRM
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein required for formate dehydrogenase activity
L3_098_000M1_scaffold_349_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3777..4289)
DNA (513bp) protein (171aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE00_9FIRM
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:EES76899.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
mobB; molybdopterin-guanine dinucleotide biosynthesis protein B
L3_098_000M1_scaffold_349_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4306..5568)
DNA (1263bp) protein (421aa)
moeA3; molybdopterin molybdenumtransferase MoeA (EC:2.10.1.1)
Molybdenum cofactor synthesis domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE01_9FIRM
Molybdenum cofactor synthesis domain-containing protein {ECO:0000313|EMBL:EES76900.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_098_000M1_scaffold_349_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5808..6242)
DNA (435bp) protein (145aa)
MOSC domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEU6_9FIRM
MOSC domain-containing protein {ECO:0000313|EMBL:CDD76475.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_098_000M1_scaffold_349_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6306..7508)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76902.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
serine phosphatase
L3_098_000M1_scaffold_349_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7495..9219)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76903.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative PAS/PAC sensor protein
L3_098_000M1_scaffold_349_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9430..12138)
DNA (2709bp) protein (903aa)
Formate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFF6_9FIRM
Formate dehydrogenase {ECO:0000313|EMBL:CDD76467.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
anaerobic dehydrogenase
L3_098_000M1_scaffold_349_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12152..14029)
DNA (1878bp) protein (626aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
NADH dehydrogenase I subunit F n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEF3_9FIRM
NADH dehydrogenase I subunit F {ECO:0000313|EMBL:CDD76466.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_098_000M1_scaffold_349_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14026..14508)
DNA (483bp) protein (161aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C6JE07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76906.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_098_000M1_scaffold_349_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14873..15565)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE09_9FIRM
Two component transcriptional regulator {ECO:0000313|EMBL:CDD76460.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_098_000M1_scaffold_349_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15576..16457)
DNA (882bp) protein (294aa)
ComEA protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE10_9FIRM
ComEA protein {ECO:0000313|EMBL:EES76909.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
competence protein ComEA helix-hairpin-helix repeat region
L3_098_000M1_scaffold_349_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16554..16988)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76910.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_098_000M1_scaffold_349_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17199..19265)
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79876.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_098_000M1_scaffold_349_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19292..19666)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76913.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_098_000M1_scaffold_349_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20052..20768
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76914.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator of the LytR/AlgR family
L3_098_000M1_scaffold_349_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20770..22089
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79871.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_098_000M1_scaffold_349_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22155..23345)
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
acetylornithine aminotransferase apoenzyme (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE17_9FIRM
L3_098_000M1_scaffold_349_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23332..24228)
DNA (897bp) protein (299aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=2 Tax=Ruminococcus RepID=C6JE18_9FIRM
L3_098_000M1_scaffold_349_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24344..25567)
DNA (1224bp) protein (408aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE19_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_098_000M1_scaffold_349_24
unknown

Not on your lists

comp(25564..25677)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_098_000M1_scaffold_349_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25829..26869)
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE20_9FIRM
L3_098_000M1_scaffold_349_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27330..28556
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=2 Tax=Ruminococcus RepID=C6JE21_9FIRM
L3_098_000M1_scaffold_349_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28702..29076)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79481.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_098_000M1_scaffold_349_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29240..30388)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79480.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permease
L3_098_000M1_scaffold_349_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31067..32344
DNA (1278bp) protein (426aa)
Cytosine deaminase and related metal-dependent hydrolases (EC:3.5.4.3)
Guanine deaminase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE24_9FIRM
Guanine deaminase {ECO:0000313|EMBL:EES76923.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_098_000M1_scaffold_349_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32507..33883
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79478.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Permeases
Displaying items 1-30 of 38 in total

View Taxonomy