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L3_098_000M1_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_373_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(247..780)
DNA (534bp) protein (178aa)
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=5 Tax=Clostridiales RepID=D4MU96_9FIRM
L3_098_000M1_scaffold_373_2
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(740..2860)
DNA (2121bp) protein (707aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z3F2_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDA31254.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_373_3
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3018..3506)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=L1Q189_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21764.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_098_000M1_scaffold_373_4
unknown

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comp(3520..4557)
DNA (1038bp) protein (346aa)
Spore germination protein n=2 Tax=Clostridiales RepID=D4MU93_9FIRM
Spore germination protein.
Spore germination protein {ECO:0000313|EMBL:CBL38959.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_5
unknown

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comp(4565..6076)
DNA (1512bp) protein (504aa)
Bacillus/Clostridium GerA spore germination protein n=2 Tax=Clostridiales RepID=D4MU92_9FIRM
Bacillus/Clostridium GerA spore germination protein.
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CBL38958.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6389..6889
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YUZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA31258.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
conserved hypothetical protein (putative transposase or invertase)
L3_098_000M1_scaffold_373_7
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6869..7141)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NYG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS22885.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_098_000M1_scaffold_373_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7161..8891)
DNA (1731bp) protein (577aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z3F6_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA31259.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
ABC-type multidrug transport system, ATPase and permease components
L3_098_000M1_scaffold_373_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8894..10690)
DNA (1797bp) protein (599aa)
ABC transporter n=2 Tax=Lachnospiraceae RepID=E5VNE7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY21759.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ABC-type multidrug transport system, ATPase and permease components
L3_098_000M1_scaffold_373_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10700..11662)
DNA (963bp) protein (321aa)
AraC-type DNA-binding domain-containing proteins n=5 Tax=Clostridiales RepID=D4MU88_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC family Bacterial regulatory helix-turn-helix protein {ECO:0000313|EMBL:CDA31261.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_373_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11906..12763)
DNA (858bp) protein (286aa)
Polysaccharide deacetylase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1H3_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EKY21756.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted xylanase/chitin deacetylase
L3_098_000M1_scaffold_373_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12782..14434)
DNA (1653bp) protein (551aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VNF0_9FIRM
L3_098_000M1_scaffold_373_13
unknown

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comp(14434..15054)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYF4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38951.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_14
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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15172..15795
DNA (624bp) protein (208aa)
Integral membrane protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VNF2_9FIRM
Integral membrane protein {ECO:0000313|EMBL:EFV15611.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
integral membrane protein TIGR01906
L3_098_000M1_scaffold_373_15
unknown

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15856..16911
DNA (1056bp) protein (352aa)
Glycerophosphoryl diester phosphodiesterase n=2 Tax=Clostridiales RepID=D4MU83_9FIRM
Glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CBL38949.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17076..18107)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZTU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32477.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Archaeal ATPase.
L3_098_000M1_scaffold_373_17
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18210..18692)
DNA (483bp) protein (161aa)
Predicted acetyltransferase n=3 Tax=Clostridiales RepID=D4MU81_9FIRM
Predicted acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:EFV15614.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_098_000M1_scaffold_373_18
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18814..20421
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z723_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32479.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Listeria/Bacterioides repeat
L3_098_000M1_scaffold_373_19
unknown

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comp(20552..21265)
DNA (714bp) protein (238aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridiales RepID=D4MU80_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL38946.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_20
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21292..22158)
DNA (867bp) protein (289aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VNF7_9FIRM
L3_098_000M1_scaffold_373_21
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22254..23813)
DNA (1560bp) protein (520aa)
LysM domain-containing protein n=2 Tax=Lachnospiraceae RepID=E5VNF8_9FIRM
LysM domain-containing protein {ECO:0000313|EMBL:EFV15617.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
LysM domain.
L3_098_000M1_scaffold_373_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23880..24128)
DNA (249bp) protein (83aa)
Uncharacterized protein conserved in bacteria n=5 Tax=Clostridiales RepID=D4MU77_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA32483.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_098_000M1_scaffold_373_23
unknown

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comp(24351..25700)
DNA (1350bp) protein (450aa)
Na+/H+-dicarboxylate symporters n=3 Tax=Clostridiales RepID=D4MU76_9FIRM
Na+/H+-dicarboxylate symporters
Na+/H+-dicarboxylate symporters {ECO:0000313|EMBL:CBL38942.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_24
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25765..26571)
DNA (807bp) protein (269aa)
Transcriptional regulator, DeoR family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PWY8_9FIRM
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EKY19965.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
DeoR family transcriptional regulator
L3_098_000M1_scaffold_373_25
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26695..27678)
DNA (984bp) protein (328aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=3 Tax=Clostridiales RepID=D4MU75_9FIRM
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EKY19966.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_373_26
unknown

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comp(27730..28698)
DNA (969bp) protein (323aa)
Sugar kinases, ribokinase family n=3 Tax=Clostridiales RepID=D4MU74_9FIRM
Sugar kinases, ribokinase family
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBL38940.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_27
unknown

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comp(28691..29530)
DNA (840bp) protein (280aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBL38939.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL38939.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Fructose-bisphosphate aldolase n=3 Tax=Clostridiales RepID=D4MU73_9FIRM
L3_098_000M1_scaffold_373_28
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29567..30280)
DNA (714bp) protein (238aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=3 Tax=Clostridiales RepID=D4MU72_9FIRM
Threonine dehydrogenase and related Zn-dependent dehydrogenases
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EKY19969.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_098_000M1_scaffold_373_29
unknown

Not on your lists

comp(30476..30622)
DNA (147bp) protein (49aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=3 Tax=Clostridiales RepID=D4MU72_9FIRM
Threonine dehydrogenase and related Zn-dependent dehydrogenases
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CBL38938.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_373_30
unknown

Not on your lists

comp(30728..32104)
DNA (1377bp) protein (459aa)
Sugar phosphate permease n=3 Tax=Clostridiales RepID=D4MU71_9FIRM
Sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CBL38937.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Displaying items 1-30 of 36 in total

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