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L3_098_000M1_scaffold_408

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_408_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19..864
DNA (846bp) protein (282aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bacteroides RepID=A6KXD2_BACV8
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_098_000M1_scaffold_408_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

877..2121
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TYA7_BACVU
zinc protease
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:KDS54934.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_000M1_scaffold_408_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2215..3525
DNA (1311bp) protein (437aa)
MATE efflux family protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H8H0_BACVU
MATE efflux family protein {ECO:0000313|EMBL:EOS00169.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
multidrug efflux protein
L3_098_000M1_scaffold_408_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3539..6106
DNA (2568bp) protein (856aa)
Two-component system sensor histidine kinase, with response regulator receiver domain n=4 Tax=root RepID=A6KXD5_BACV8
Two-component system sensor histidine kinase, with response regulator receiver domain {ECO:0000313|EMBL:ABR38099.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
two-component hybrid sensor kinase/response regulator
L3_098_000M1_scaffold_408_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6208..7590
DNA (1383bp) protein (461aa)
Two-component system response regulator n=6 Tax=root RepID=A6KXD6_BACV8
two-component system response regulator
AAA domain family protein {ECO:0000313|EMBL:KDS54937.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_000M1_scaffold_408_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7875..8180
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V535_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG19046.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_098_000M1_scaffold_408_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8245..8916)
DNA (672bp) protein (224aa)
Ribosomal large subunit pseudouridine synthase D n=7 Tax=Bacteroides RepID=A6KXD8_BACV8
ribosomal large subunit pseudouridine synthase D
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:KDS54939.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_000M1_scaffold_408_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8918..9664)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:KDS28205.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KDS28205.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
3-oxoacyl-[acyl-carrier protein] reductase n=14 Tax=Bacteroides RepID=A6KXD9_BACV8
3-oxoacyl-ACP reductase
L3_098_000M1_scaffold_408_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9696..10295)
DNA (600bp) protein (200aa)
Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXE0_BACV8
TetR family transcriptional regulator
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDS28206.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_098_000M1_scaffold_408_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10938..11528
DNA (591bp) protein (197aa)
RNA polymerase sigma-70 factor n=6 Tax=Bacteroides RepID=C6Z768_9BACE
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY74460.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_000M1_scaffold_408_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11583..12518
DNA (936bp) protein (312aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V540_BACVU
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFG19051.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
anti-sigma factor
L3_098_000M1_scaffold_408_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12671..16024
DNA (3354bp) protein (1118aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z770_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17310.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_098_000M1_scaffold_408_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16038..17579
DNA (1542bp) protein (514aa)
SusD family protein n=4 Tax=Bacteroides RepID=C6Z771_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY74457.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_098_000M1_scaffold_408_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17678..20125
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HG96_BACVU
Glycoside hydrolase family 2, candidate beta-glycosidase {ECO:0000313|EMBL:KDS48992.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
beta-glycosidase
L3_098_000M1_scaffold_408_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20122..22203
DNA (2082bp) protein (694aa)
Glycosyl hydrolase family 20, catalytic domain protein n=2 Tax=Bacteroides vulgatus RepID=D4V544_BACVU
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:KDS48991.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glycoside hydrolase
L3_098_000M1_scaffold_408_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22239..24944
DNA (2706bp) protein (902aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=2 Tax=Bacteroides RepID=C6Z774_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EET16733.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
beta-glycosidase
L3_098_000M1_scaffold_408_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25059..26657
DNA (1599bp) protein (533aa)
Arylsulfatase n=3 Tax=Bacteroides RepID=C6Z775_9BACE
Arylsulfatase {ECO:0000313|EMBL:EFV67073.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
arylsulfatase
L3_098_000M1_scaffold_408_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26939..28489
DNA (1551bp) protein (517aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KXE9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS00184.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_408_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29279..30622)
DNA (1344bp) protein (448aa)
ATP-dependent RNA helicase RhlE n=5 Tax=Bacteroides RepID=C6Z785_9BACE
ATP-dependent RNA helicase DeaD
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:EOS00185.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_408_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30826..32400)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P0E4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17822.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_098_000M1_scaffold_408_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32505..33281)
DNA (777bp) protein (259aa)
PQQ enzyme repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V552_BACVU
hypothetical protein
PQQ enzyme repeat protein {ECO:0000313|EMBL:EFG19063.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_098_000M1_scaffold_408_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33309..34247)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H852_BACVU
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:KDS48982.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_098_000M1_scaffold_408_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34393..35343
DNA (951bp) protein (317aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Cysteine synthase A n=6 Tax=Bacteroides RepID=C6Z789_9BACE
cysteine synthase
L3_098_000M1_scaffold_408_24
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35350..36414
DNA (1065bp) protein (355aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
tRNA-specific 2-thiouridylase MnmA 1 n=6 Tax=Bacteroides RepID=MNMA1_BACV8
L3_098_000M1_scaffold_408_25
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36411..37055)
DNA (645bp) protein (215aa)
Transcriptional regulator n=5 Tax=Bacteroides RepID=A6KXF8_BACV8
transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EET16750.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_098_000M1_scaffold_408_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37652..38746)
DNA (1095bp) protein (365aa)
tryptophanyl-tRNA synthetase II (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=7 Tax=Bacteroides RepID=A6KXF9_BACV8
Tryptophan-tRNA ligase {ECO:0000313|EMBL:EOR99724.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_408_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38850..39641
DNA (792bp) protein (264aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KXG0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR99725.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_408_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39896..43117
DNA (3222bp) protein (1074aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glutamine-dependent carbamyl phosphate synthetase n=3 Tax=Bacteroides RepID=A6KXG1_BACV8
glutamine-dependent carbamyl phosphate synthetase
L3_098_000M1_scaffold_408_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43183..45987)
DNA (2805bp) protein (935aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KXG2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET16754.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_098_000M1_scaffold_408_30
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46008..46508)
DNA (501bp) protein (167aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KXG3_BACV8
protein disulfide isomerase
Uncharacterized protein {ECO:0000313|EMBL:EFV67114.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Displaying items 1-30 of 48 in total

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