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L3_098_000M1_scaffold_447

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_447_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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127..1779
DNA (1653bp) protein (551aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
DRTGG domain protein n=3 Tax=Lachnospiraceae RepID=A7AYN7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49900.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_098_000M1_scaffold_447_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1792..2385
DNA (594bp) protein (198aa)
Flavin reductase-like protein n=2 Tax=Ruminococcus gnavus RepID=A7AYN6_RUMGN
Flavin reductase-like protein {ECO:0000313|EMBL:EDN79200.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_098_000M1_scaffold_447_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2476..3966)
DNA (1491bp) protein (497aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=3 Tax=Lachnospiraceae RepID=A7AYN5_RUMGN
L3_098_000M1_scaffold_447_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3985..5160)
DNA (1176bp) protein (392aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
galactokinase (EC:2.7.1.6)
Galactokinase n=3 Tax=Lachnospiraceae RepID=A7AYN4_RUMGN
L3_098_000M1_scaffold_447_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5295..6152
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYN3_RUMGN
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN79197.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, AraC family
L3_098_000M1_scaffold_447_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6223..6906
DNA (684bp) protein (228aa)
Polysaccharide deacetylase n=2 Tax=Ruminococcus gnavus RepID=A7AYN2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20624.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted xylanase/chitin deacetylase
L3_098_000M1_scaffold_447_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6927..7640
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66843.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_098_000M1_scaffold_447_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7670..8986
DNA (1317bp) protein (439aa)
Recombination factor protein RarA n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYN0_RUMGN
Recombination factor protein RarA {ECO:0000313|EMBL:EDN79194.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L3_098_000M1_scaffold_447_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8963..9475)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYM9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79193.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_447_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9468..10391)
DNA (924bp) protein (308aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYM8_RUMGN
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EDN79192.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
radical SAM protein, TIGR01212 family
L3_098_000M1_scaffold_447_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10394..11542)
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYM7_RUMGN
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EDN79191.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_447_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11783..13120
DNA (1338bp) protein (446aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Transcription termination factor Rho n=3 Tax=Lachnospiraceae RepID=A7AYM6_RUMGN
transcription termination factor Rho
L3_098_000M1_scaffold_447_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13261..14040
DNA (780bp) protein (260aa)
Formate/nitrite transporter n=4 Tax=Clostridiales RepID=A7AYM5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20617.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
formate/nitrite family of transporter
L3_098_000M1_scaffold_447_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14160..14360
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=6 Tax=Clostridiales RepID=R6F565_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RpmE; 50S ribosomal protein L31
L3_098_000M1_scaffold_447_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14433..15404
DNA (972bp) protein (324aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AYM3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49886.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted metal-dependent enzyme
L3_098_000M1_scaffold_447_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15401..16252
DNA (852bp) protein (284aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Release factor glutamine methyltransferase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYM2_RUMGN
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_098_000M1_scaffold_447_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16282..17352
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYM1_RUMGN
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_098_000M1_scaffold_447_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17560..17955
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AYM0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79184.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_447_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18030..18260
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYL9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79183.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_447_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18309..18638)
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYL8_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN79182.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Helix-turn-helix.
L3_098_000M1_scaffold_447_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18841..19008)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYL7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79181.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_447_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19138..19770
DNA (633bp) protein (211aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYL6_RUMGN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDN79180.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_098_000M1_scaffold_447_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20234..21136
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7AYL4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68542.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_098_000M1_scaffold_447_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21164..22381
DNA (1218bp) protein (406aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Aminotransferase, class I/II n=3 Tax=Lachnospiraceae RepID=A7AYL3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20608.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_098_000M1_scaffold_447_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22359..23441
DNA (1083bp) protein (361aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYL2_RUMGN
L3_098_000M1_scaffold_447_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23435..24283
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UIF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68562.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted membrane protein
L3_098_000M1_scaffold_447_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24315..24662)
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TS32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49876.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted transcriptional regulator
L3_098_000M1_scaffold_447_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24849..25301
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AYK8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49875.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_447_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25394..26455
DNA (1062bp) protein (354aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=3 Tax=Lachnospiraceae RepID=A7AYK7_RUMGN
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_098_000M1_scaffold_447_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26443..30954
DNA (4512bp) protein (1504aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DNA polymerase III polC-type n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYK6_RUMGN
DNA polymerase III subunit alpha
Displaying items 1-30 of 35 in total

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