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L3_098_000M1_scaffold_474

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_474_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..956)
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49631.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ROK family protein
L3_098_000M1_scaffold_474_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1076..2299)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Lachnospiraceae RepID=F7JTZ2_9FIRM
L3_098_000M1_scaffold_474_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2737..3480)
DNA (744bp) protein (248aa)
CutC family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B643_RUMGN
CutC family protein {ECO:0000313|EMBL:EDN76595.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized protein involved in copper resistance
L3_098_000M1_scaffold_474_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3721..5178)
DNA (1458bp) protein (486aa)
PTS system, N-acetylglucosamine-specific IIBC component n=4 Tax=Clostridiales RepID=A7B642_RUMGN
PTS system protein {ECO:0000313|EMBL:EGN49634.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L3_098_000M1_scaffold_474_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5275..5763)
DNA (489bp) protein (163aa)
PTS system, glucose subfamily, IIA component n=3 Tax=Lachnospiraceae RepID=A7B641_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18096.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
PTS system, beta-glucosides-specific IIA component / PTS system, beta-glucosides-specific IIB component / PTS system, beta-glucosides-specific IIC component
L3_098_000M1_scaffold_474_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5778..6614)
DNA (837bp) protein (279aa)
Transcription antiterminator LicT n=4 Tax=Clostridiales RepID=A7B640_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49636.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional antiterminator, BglG family
L3_098_000M1_scaffold_474_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6907..7638)
DNA (732bp) protein (244aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B639_RUMGN
L3_098_000M1_scaffold_474_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7782..8522)
DNA (741bp) protein (247aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=3 Tax=Lachnospiraceae RepID=A7B638_RUMGN
L3_098_000M1_scaffold_474_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8544..9368)
DNA (825bp) protein (275aa)
Energy-coupling factor transporter transmembrane protein EcfT n=3 Tax=Clostridiales RepID=F7JTZ9_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_098_000M1_scaffold_474_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9365..10237)
DNA (873bp) protein (291aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BUF0_RUMGN
ABC-type cobalt transport system, ATPase component
L3_098_000M1_scaffold_474_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10222..11067)
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B635_RUMGN
ABC-type cobalt transport system, ATPase component
L3_098_000M1_scaffold_474_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11039..11980)
DNA (942bp) protein (314aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BSE2_RUMGN
Putative membrane protein {ECO:0000313|EMBL:EDN76586.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_098_000M1_scaffold_474_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12158..12676)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Clostridiales RepID=A7B632_RUMGN
L3_098_000M1_scaffold_474_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12900..13817
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B631_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18105.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_098_000M1_scaffold_474_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13831..14082
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BUF3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18106.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
MerR family transcriptional regulator
L3_098_000M1_scaffold_474_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14203..15315
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B629_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN76581.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_098_000M1_scaffold_474_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15397..16320
DNA (924bp) protein (308aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B628_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49647.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_474_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16313..16810
DNA (498bp) protein (166aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B627_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49648.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_098_000M1_scaffold_474_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17199..18131)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B619_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76571.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein (putative transposase or invertase)
L3_098_000M1_scaffold_474_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18475..19533)
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B617_RUMGN
integral membrane sensor signal transduction histidine kinase
L3_098_000M1_scaffold_474_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19499..20170)
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=3 Tax=Lachnospiraceae RepID=A7B616_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49651.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
two-component response regulator
L3_098_000M1_scaffold_474_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20180..22228)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TN41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67065.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC transporter permease
L3_098_000M1_scaffold_474_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22218..22994)
DNA (777bp) protein (259aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B614_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN76566.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC transporter-like protein
L3_098_000M1_scaffold_474_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23110..24993)
DNA (1884bp) protein (628aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=A7B613_RUMGN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ67063.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type multidrug transport system, ATPase and permease components
L3_098_000M1_scaffold_474_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24986..26719)
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B612_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN76564.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type multidrug transport system, ATPase and permease components
L3_098_000M1_scaffold_474_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26712..27203)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTI1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49656.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transcriptional regulators
L3_098_000M1_scaffold_474_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27501..27821
DNA (321bp) protein (107aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B609_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49657.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter permease protein
L3_098_000M1_scaffold_474_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27897..28670)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTK8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18120.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type uncharacterized transport system, ATPase component
L3_098_000M1_scaffold_474_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28663..29544)
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B607_RUMGN
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDN76559.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type uncharacterized transport system, permease component
L3_098_000M1_scaffold_474_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29570..30580)
DNA (1011bp) protein (337aa)
ABC transporter substrate binding protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7D7_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:CCZ67056.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type uncharacterized transport system, periplasmic component
Displaying items 1-30 of 36 in total

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