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L3_098_000M1_scaffold_500

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_500_1
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..757)
DNA (756bp) protein (252aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Blautia sp. CAG:257 RepID=R5WLL7_9FIRM
L3_098_000M1_scaffold_500_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(780..1775)
DNA (996bp) protein (332aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=2 Tax=Clostridium RepID=B6FN54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22654.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_500_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1924..3255)
DNA (1332bp) protein (444aa)
Magnesium transporter n=2 Tax=Clostridium RepID=B6FN53_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
magnesium transporter
L3_098_000M1_scaffold_500_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3400..4626
DNA (1227bp) protein (409aa)
UPF0348 protein CLONEX_01560 n=2 Tax=Clostridium RepID=B6FN51_9CLOT
UPF0348 protein BN618_00446 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted nucleotidyltransferase
L3_098_000M1_scaffold_500_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4653..5510)
DNA (858bp) protein (286aa)
EDD domain protein, DegV family n=3 Tax=Clostridium RepID=B6FN49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22651.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
EDD domain protein, DegV family
L3_098_000M1_scaffold_500_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5530..6942)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FN48_9CLOT
UPF0210 protein BN618_00444 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_500_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6963..7235)
DNA (273bp) protein (91aa)
UPF0237 protein CLONEX_01555 n=2 Tax=Clostridium RepID=B6FN47_9CLOT
UPF0237 protein CLONEX_01555 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ACT domain-containing protein
L3_098_000M1_scaffold_500_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7252..8049)
DNA (798bp) protein (266aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN46_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEA82546.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_098_000M1_scaffold_500_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8046..8648)
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=2 Tax=Clostridium RepID=B6FN45_9CLOT
L3_098_000M1_scaffold_500_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8648..11266)
DNA (2619bp) protein (873aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=2 Tax=Clostridium RepID=B6FN44_9CLOT
L3_098_000M1_scaffold_500_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11308..11760)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22645.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_500_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11750..12295)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PP98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22644.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_098_000M1_scaffold_500_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12313..13416)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PE84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22643.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
aldo/keto reductase
L3_098_000M1_scaffold_500_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13481..15196)
DNA (1716bp) protein (572aa)
Asparagine synthetase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QL03_9CLOT
Asparagine synthetase {ECO:0000313|EMBL:CDC22642.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
asparagine synthase
L3_098_000M1_scaffold_500_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15292..16983)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22641.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_098_000M1_scaffold_500_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17171..17788)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82559.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_098_000M1_scaffold_500_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17808..18455)
DNA (648bp) protein (216aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN36_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA82558.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter ATP-binding protein
L3_098_000M1_scaffold_500_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18458..19288)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82557.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_500_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19275..20138)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82556.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_500_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20155..20793)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82555.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_098_000M1_scaffold_500_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20881..21300)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82554.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_098_000M1_scaffold_500_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21313..21879)
DNA (567bp) protein (189aa)
Accessory protein regulator protein B n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN31_9CLOT
Accessory protein regulator protein B {ECO:0000313|EMBL:EEA82553.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AIP processing-secretion protein
L3_098_000M1_scaffold_500_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21876..22028)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82552.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_098_000M1_scaffold_500_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22249..23496)
DNA (1248bp) protein (416aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FN29_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEA82551.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative sensor histidine kinase
L3_098_000M1_scaffold_500_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23501..24346)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PP88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22634.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LytTr DNA-binding domain-containing protein
L3_098_000M1_scaffold_500_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24542..25810)
DNA (1269bp) protein (423aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PE73_9CLOT
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CDC22633.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_098_000M1_scaffold_500_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25971..26237)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Clostridium RepID=B6FN25_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
SSU ribosomal protein S15P
L3_098_000M1_scaffold_500_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26372..27307)
DNA (936bp) protein (312aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVY8_9CLOT
L3_098_000M1_scaffold_500_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27325..28236)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGD0_9CLOT
L3_098_000M1_scaffold_500_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28250..29191)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PP83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22629.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Exopolyphosphatase-related proteins
Displaying items 1-30 of 33 in total

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