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L3_098_000M1_scaffold_501

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_501_1
unknown

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

L3_098_000M1_scaffold_501_2
unknown

Not on your lists

comp(261..599)
DNA (339bp) protein (113aa)

This feature has no annotations

L3_098_000M1_scaffold_501_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(732..935)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44566.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_098_000M1_scaffold_501_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(939..1646)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44567.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transcriptional regulator, GntR family
L3_098_000M1_scaffold_501_5
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1665..2576)
DNA (912bp) protein (304aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNV9_9CLOT
L3_098_000M1_scaffold_501_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2734..3501)
DNA (768bp) protein (256aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UBS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD16197.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
GntR family transcriptional regulator
L3_098_000M1_scaffold_501_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3598..4170)
DNA (573bp) protein (191aa)
Putative permease n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TS90_9FIRM
Putative permease {ECO:0000313|EMBL:CCZ68595.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
uracil-xanthine permease
L3_098_000M1_scaffold_501_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4167..4883)
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BLZ1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49228.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
uracil-xanthine permease
L3_098_000M1_scaffold_501_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4903..5382)
DNA (480bp) protein (160aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=4 Tax=Clostridiales RepID=A7B6T8_RUMGN
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EDN76200.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
CMP/dCMP deaminase zinc-binding protein
L3_098_000M1_scaffold_501_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5526..6260)
DNA (735bp) protein (245aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RPI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17410.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_098_000M1_scaffold_501_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6323..7117
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A2K7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ46196.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_098_000M1_scaffold_501_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7050..7835)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44245.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
N-acetyltransferase GCN5
L3_098_000M1_scaffold_501_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7837..8355)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=6 Tax=Clostridium bolteae RepID=A8RPJ4_9CLOT
L3_098_000M1_scaffold_501_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8473..8934)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41443.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_098_000M1_scaffold_501_15
unknown

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comp(9099..10004)
DNA (906bp) protein (302aa)

This feature has no annotations

L3_098_000M1_scaffold_501_16
unknown

Not on your lists

comp(10004..10486)
DNA (483bp) protein (161aa)

This feature has no annotations

L3_098_000M1_scaffold_501_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10605..12104)
DNA (1500bp) protein (500aa)
tagaturonate reductase (EC:1.1.1.58)
Tagaturonate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5S9_9CLOT
Tagaturonate reductase {ECO:0000313|EMBL:CCY44262.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_098_000M1_scaffold_501_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12673..12942)
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW13_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
30S ribosomal protein S18
L3_098_000M1_scaffold_501_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12985..13461)
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTZ5_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
single-strand binding protein
L3_098_000M1_scaffold_501_20
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13509..13796)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KL02_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
SSU ribosomal protein S6P
L3_098_000M1_scaffold_501_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13920..14135)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG57467.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_098_000M1_scaffold_501_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14188..15183)
DNA (996bp) protein (332aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RXU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14412.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
aldo/keto reductase
L3_098_000M1_scaffold_501_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15198..15926)
DNA (729bp) protein (243aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVY3_9CLOT
L3_098_000M1_scaffold_501_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16080..16745
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XJP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96158.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
GntR family transcriptional regulator
L3_098_000M1_scaffold_501_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16855..18309)
DNA (1455bp) protein (485aa)
gluconate permease n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B30298
Gluconate:H+ symporter (GntP) family transporter {ECO:0000313|EMBL:ENY96157.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
gluconate transporter
L3_098_000M1_scaffold_501_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18346..19527)
DNA (1182bp) protein (394aa)
Altronate dehydratase (EC:4.2.1.7)
Altronate dehydratase {ECO:0000313|EMBL:CBL41443.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CBL41443.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Altronate dehydratase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUF1_9FIRM
L3_098_000M1_scaffold_501_27

Not on your lists

comp(19524..19835)
DNA (312bp) protein (104aa)
D-galactarate dehydratase n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B3F465
SAF domain-containing protein {ECO:0000313|EMBL:EKC81680.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
altronate dehydratase
L3_098_000M1_scaffold_501_28
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19837..21123)
DNA (1287bp) protein (429aa)
Uncharacterized conserved protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUF0_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL41442.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_098_000M1_scaffold_501_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21330..22949)
DNA (1620bp) protein (540aa)
LysM domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV9_9FIRM
LysM domain protein {ECO:0000313|EMBL:EEQ61103.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LysM domain.
L3_098_000M1_scaffold_501_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23005..23868)
DNA (864bp) protein (288aa)
PP-loop family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV8_9FIRM
PP-loop family protein {ECO:0000313|EMBL:EEQ61102.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Displaying items 1-30 of 34 in total

View Taxonomy