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L3_098_000M1_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_545_1
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..77
DNA (75bp) protein (25aa)
ISPg3 transposase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VBF3_9BACE
ISPg3 transposase {ECO:0000313|EMBL:CCZ87913.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Transposase DDE domain.
L3_098_000M1_scaffold_545_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52..741
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NRK6_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14432.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_098_000M1_scaffold_545_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(865..2724)
DNA (1860bp) protein (620aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZMC8_BACSE
L3_098_000M1_scaffold_545_4
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2766..3275)
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=3 Tax=Bacteroides RepID=B0NRK4_BACSE
L3_098_000M1_scaffold_545_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3411..3791)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=2 Tax=Bacteroides stercoris RepID=B0NRK3_BACSE
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
glycine cleavage system H protein
L3_098_000M1_scaffold_545_6
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3824..4501)
DNA (678bp) protein (226aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NRK2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49434.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_545_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4553..6043)
DNA (1491bp) protein (497aa)
RNA polymerase sigma-54 factor n=1 Tax=Bacteroides stercoris CC31F RepID=S3YHN8_BACSE
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EPH21886.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
RNA polymerase, sigma 54 subunit, RpoN/SigL
L3_098_000M1_scaffold_545_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6269..7642
DNA (1374bp) protein (458aa)
Xaa-Pro aminopeptidase n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZMC1_BACSE
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EPH21885.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
peptidase M24
L3_098_000M1_scaffold_545_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7728..9233)
DNA (1506bp) protein (502aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ9_BACSE
integral membrane sensor signal transduction histidine kinase
L3_098_000M1_scaffold_545_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9405..11078)
DNA (1674bp) protein (558aa)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ8_BACSE
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:EDS14424.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
uridine kinase
L3_098_000M1_scaffold_545_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11162..12859
DNA (1698bp) protein (566aa)
Na/Pi-cotransporter II-like protein n=3 Tax=Bacteroides RepID=B0NRJ7_BACSE
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EDS14423.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Na/Pi-cotransporter II-related protein
L3_098_000M1_scaffold_545_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12856..13017)
DNA (162bp) protein (54aa)
Rubredoxin n=3 Tax=Bacteroides RepID=B0NRJ6_BACSE
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Rubredoxin-type Fe(Cys)4 protein
L3_098_000M1_scaffold_545_13
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13260..15944
DNA (2685bp) protein (895aa)
Calcium-translocating P-type ATPase PMCA-type n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B7W5_9BACE
Calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CDA49427.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
calcium-translocating P-type ATPase, PMCA-type
L3_098_000M1_scaffold_545_14
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15949..16566
DNA (618bp) protein (206aa)
HAD hydrolase family IA variant 3 n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AS95_9BACE
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA49426.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
HAD-superfamily hydrolase, subfamily IA, variant 3
L3_098_000M1_scaffold_545_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16588..17508
DNA (921bp) protein (307aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
riboflavin kinase; FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ1_BACSE
L3_098_000M1_scaffold_545_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17718..17807
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6AKV6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49424.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_098_000M1_scaffold_545_17
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17860..18645
DNA (786bp) protein (262aa)
CAAX amino terminal protease family protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABU8_9BACE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDA49423.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Abortive infection protein
L3_098_000M1_scaffold_545_18
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18642..19310
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NRI9_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49422.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_545_19
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19356..19544
DNA (189bp) protein (63aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NRI8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49421.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
transcriptional regulator
L3_098_000M1_scaffold_545_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19730..20158)
DNA (429bp) protein (143aa)
Fe-S metabolism associated domain protein n=2 Tax=Bacteroides RepID=B0NRI7_BACSE
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:EDS14413.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
cysteine desulfurase
L3_098_000M1_scaffold_545_21
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20179..21177)
DNA (999bp) protein (333aa)
Peptidase M28 family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AKV0_9BACE
Peptidase M28 family {ECO:0000313|EMBL:CDA49419.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Predicted aminopeptidases
L3_098_000M1_scaffold_545_22
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21174..22112)
DNA (939bp) protein (313aa)
LD-carboxypeptidase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABU3_9BACE
LD-carboxypeptidase {ECO:0000313|EMBL:CDA49418.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
peptidase U61
L3_098_000M1_scaffold_545_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22468..23424
DNA (957bp) protein (319aa)
phosphate butyryltransferase (EC:2.3.1.19)
Phosphate acetyl/butyryl transferase n=3 Tax=Bacteroides RepID=B0NRI3_BACSE
Phosphate acetyl/butyryl transferase {ECO:0000313|EMBL:EDS14409.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_098_000M1_scaffold_545_24
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23440..24501
DNA (1062bp) protein (354aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AS83_9BACE
L3_098_000M1_scaffold_545_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24869..26494)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRI0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14406.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_098_000M1_scaffold_545_26
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26508..29945)
DNA (3438bp) protein (1146aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AKU5_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA49414.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000M1_scaffold_545_27
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30056..31072)
DNA (1017bp) protein (339aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABT7_9BACE
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDA49413.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative anti-sigma factor
L3_098_000M1_scaffold_545_28
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31110..31670)
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides RepID=B0NRH7_BACSE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDA49412.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative RNA polymerase ECF-type sigma factor
L3_098_000M1_scaffold_545_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31839..33872)
DNA (2034bp) protein (678aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Bacteroides stercoris RepID=B0NRH4_BACSE
L3_098_000M1_scaffold_545_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34003..35154
DNA (1152bp) protein (384aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDS14399.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDS14399.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Antioxidant, AhpC/TSA family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRH3_BACSE
alkyl hydroperoxide reductase
Displaying items 1-30 of 33 in total

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