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L3_098_000M1_scaffold_547

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_547_1
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(80..4141)
DNA (4062bp) protein (1354aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteria RepID=C6Z0U6_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EET14505.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_098_000M1_scaffold_547_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4373..6886
DNA (2514bp) protein (838aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroides RepID=C6Z0U7_9BACE
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EET14506.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
glycoside hydrolase
L3_098_000M1_scaffold_547_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6895..8478
DNA (1584bp) protein (528aa)
Glycosyl hydrolase, family 43 n=5 Tax=Bacteroides RepID=C6Z0U8_9BACE
Glycosyl hydrolases 43 family protein {ECO:0000313|EMBL:KDS54572.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glycoside hydrolase
L3_098_000M1_scaffold_547_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8491..11085
DNA (2595bp) protein (865aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0U9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17588.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_098_000M1_scaffold_547_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11082..13127
DNA (2046bp) protein (682aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Alpha-glucuronidase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJY2_BACVU
alpha-glycosidase
L3_098_000M1_scaffold_547_6
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13155..15092
DNA (1938bp) protein (646aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=3 Tax=Bacteroides RepID=C6Z0V1_9BACE
Sialic acid-specific 9-O-acetylesterase {ECO:0000313|EMBL:EFV66480.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
sialic acid-specific 9-O-acetylesterase
L3_098_000M1_scaffold_547_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15246..16376)
DNA (1131bp) protein (377aa)
Coproporphyrinogen III oxidase n=3 Tax=Bacteroides RepID=E5UWG2_9BACE
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EOS04227.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
coproporphyrinogen III oxidase
L3_098_000M1_scaffold_547_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16464..16580)
DNA (117bp) protein (39aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UMN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04226.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_547_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16613..18772
DNA (2160bp) protein (720aa)
Translation elongation factor G n=4 Tax=Bacteroides RepID=R9HSQ9_BACVU
fusA; elongation factor G
Putative translation elongation factor G {ECO:0000313|EMBL:EFG18553.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_098_000M1_scaffold_547_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19005..20603
DNA (1599bp) protein (533aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Sensor protein rprX n=8 Tax=Bacteroides RepID=I8VSL5_9BACE
histidine kinase
L3_098_000M1_scaffold_547_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20605..21303
DNA (699bp) protein (233aa)
Two-component system response regulator n=17 Tax=Bacteroides RepID=A6KWD9_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CDF19795.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_000M1_scaffold_547_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21379..21561)
DNA (183bp) protein (61aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=C3PVX7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF19794.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_000M1_scaffold_547_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21670..22116)
DNA (447bp) protein (149aa)
Transcriptional regulator n=14 Tax=Bacteroides RepID=A6KWD8_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04221.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_547_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


22326..22670
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=7 Tax=Bacteroides RepID=RS6_BACV8
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_547_15
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


22673..22942
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=25 Tax=root RepID=RS18_BACV8
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
L3_098_000M1_scaffold_547_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


22958..23401
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=7 Tax=Bacteroides RepID=RL9_BACV8
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_000M1_scaffold_547_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23471..24163)
DNA (693bp) protein (231aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KWD4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04217.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_547_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24318..24518)
DNA (201bp) protein (67aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z0W2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY77753.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_098_000M1_scaffold_547_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24679..26352)
DNA (1674bp) protein (558aa)
Long-chain-fatty-acid-CoA ligase n=7 Tax=Bacteroides RepID=E5UWH3_9BACE
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:CDF17797.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
long-chain-fatty-acid-CoA ligase
L3_098_000M1_scaffold_547_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26458..27774
DNA (1317bp) protein (439aa)
tRNA methylthiotransferase YqeV n=7 Tax=Bacteroides RepID=C6Z0W4_9BACE
Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:CDF17796.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_000M1_scaffold_547_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27810..28835
DNA (1026bp) protein (342aa)
Glycosyltransferase, group 2 family protein n=5 Tax=Bacteroides RepID=C6Z0W5_9BACE
glycosyl transferase family protein
Glycosyltransferase family 2 {ECO:0000313|EMBL:CDF17795.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_000M1_scaffold_547_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28923..29804
DNA (882bp) protein (294aa)
Radical SAM domain protein n=5 Tax=Bacteroides RepID=C6Z0W6_9BACE
DNA repair photolyase
Uncharacterized protein {ECO:0000313|EMBL:EOS04212.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_547_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29914..30174)
DNA (261bp) protein (87aa)
Dihydroneopterin aldolase n=6 Tax=Bacteroides RepID=A6KWC9_BACV8
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:EIY77758.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_000M1_scaffold_547_24
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30318..33323
DNA (3006bp) protein (1002aa)
Uncharacterized protein n=4 Tax=root RepID=C6Z0W8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET14527.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_098_000M1_scaffold_547_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33416..35962)
DNA (2547bp) protein (849aa)
Ribonucleoside-diphosphate reductase n=3 Tax=Bacteroides RepID=C6Z0W9_9BACE
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EOS04209.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
ribonucleoside reductase
L3_098_000M1_scaffold_547_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36306..37046
DNA (741bp) protein (247aa)
Nitroreductase family protein n=5 Tax=Bacteroides RepID=C6Z0X0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY77761.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
oxidoreductase
L3_098_000M1_scaffold_547_27
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37131..38537)
DNA (1407bp) protein (469aa)
Chromosomal replication initiator protein DnaA n=6 Tax=Bacteroides RepID=A6KWC5_BACV8
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_000M1_scaffold_547_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38875..39762)
DNA (888bp) protein (296aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L7Y1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41795.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_098_000M1_scaffold_547_29
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39782..41011)
DNA (1230bp) protein (410aa)
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteroides RepID=C6Z0X3_9BACE
N-acetylmuramoyl-L-alanine amidase amiA {ECO:0000313|EMBL:EFV66503.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
N-acetylmuramoyl-L-alanine amidase amiA
L3_098_000M1_scaffold_547_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41168..42124
DNA (957bp) protein (319aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0X4_9BACE
sodium-dependent transporter
Putative sodium-dependent transporter {ECO:0000313|EMBL:ABR41793.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying items 1-30 of 56 in total

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