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L3_098_000M1_scaffold_594

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_594_1
unknown

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2..193
DNA (192bp) protein (64aa)

This feature has no annotations

L3_098_000M1_scaffold_594_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

138..3272
DNA (3135bp) protein (1045aa)
Putative type I restriction-modification system, R subunit id=3591313 bin=GWC2_Bacteroidetes_46_850 species=Prevotella ruminicola genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
DNA methylase
Tax=GWC2_Bacteroidetes_46_850_curated
L3_098_000M1_scaffold_594_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3311..5056
DNA (1746bp) protein (582aa)
Uncharacterized conserved protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL78_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL07630.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_098_000M1_scaffold_594_4
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5058..6539
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPJ7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57716.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_098_000M1_scaffold_594_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6477..6674)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4ML95_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34528.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_098_000M1_scaffold_594_6
Neisseria bacilliformis, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6723..7439)
DNA (717bp) protein (239aa)
Sel1 repeat superfamily protein n=1 Tax=Neisseria bacilliformis ATCC BAA-1200 RepID=F2BAP1_9NEIS
Sel1 repeat superfamily protein {ECO:0000313|EMBL:EGF11504.1}; TaxID=888742 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria bacilliformis ATCC BAA-1200.;"
Sel1 domain-containing protein repeat-containing protein
L3_098_000M1_scaffold_594_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7452..9167)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UFS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69632.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_098_000M1_scaffold_594_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9181..11760)
DNA (2580bp) protein (860aa)
Putative ATP-binding protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TP18_9FIRM
Putative ATP-binding protein {ECO:0000313|EMBL:CDC69636.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_098_000M1_scaffold_594_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11779..12258)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TIW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69639.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_098_000M1_scaffold_594_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12605..13198)
DNA (594bp) protein (198aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSL6_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDN00973.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Cyclic nucleotide-binding domain.
L3_098_000M1_scaffold_594_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13383..14267)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JT16_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96235.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_098_000M1_scaffold_594_12
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14268..15245)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9W1_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16406.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_098_000M1_scaffold_594_13
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(15247..15627)
DNA (381bp) protein (127aa)
Putative uncharacterized protein id=3603885 bin=GWF2_Clostridiales_36_10 species=Ruminococcus champanellensis genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
L3_098_000M1_scaffold_594_14
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(15620..16390)
DNA (771bp) protein (257aa)
Uncharacterized protein id=3603778 bin=GWF2_Clostridiales_36_10 species=Subdoligranulum variabile genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
L3_098_000M1_scaffold_594_15
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(16392..18272)
DNA (1881bp) protein (627aa)
Site-specific recombinases, DNA invertase Pin homologs id=3603776 bin=GWF2_Clostridiales_36_10 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Site-specific recombinases, DNA invertase Pin homologs
Tax=GWF2_Clostridiales_36_10_curated
L3_098_000M1_scaffold_594_16
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(18265..18873)
DNA (609bp) protein (203aa)
Putative uncharacterized protein id=3603774 bin=GWF2_Clostridiales_36_10 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
L3_098_000M1_scaffold_594_17
unknown

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19155..19301
DNA (147bp) protein (49aa)

This feature has no annotations

L3_098_000M1_scaffold_594_18
unknown

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19246..19572
DNA (327bp) protein (109aa)

This feature has no annotations

L3_098_000M1_scaffold_594_19
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19612..19977)
DNA (366bp) protein (122aa)
Helix-turn-helix n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9W6_RUMC1
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL16411.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_098_000M1_scaffold_594_20
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

20113..20475
DNA (363bp) protein (121aa)
Helix-turn-helix n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JT37_9FIRM
Helix-turn-helix.
Tax=GWF2_Clostridiales_36_10_curated
L3_098_000M1_scaffold_594_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20737..20943
DNA (207bp) protein (69aa)
Conserved domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H183_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDB27729.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative transcriptional regulator
L3_098_000M1_scaffold_594_22
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20980..22260
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TQY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC70321.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_098_000M1_scaffold_594_23
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22241..22807
DNA (567bp) protein (189aa)
Metallophosphoesterase n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUI0_SYNGF
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADY54393.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_098_000M1_scaffold_594_24
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22804..23676
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EXM38464.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L3_098_000M1_scaffold_594_25
unknown

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23669..23884
DNA (216bp) protein (72aa)

This feature has no annotations

L3_098_000M1_scaffold_594_26
unknown

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23895..24209
DNA (315bp) protein (105aa)

This feature has no annotations

L3_098_000M1_scaffold_594_27
unknown

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24240..24608
DNA (369bp) protein (123aa)

This feature has no annotations

L3_098_000M1_scaffold_594_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24930..25628)
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YW60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34040.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
integral membrane protein
L3_098_000M1_scaffold_594_29
unknown

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comp(25912..26022)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_098_000M1_scaffold_594_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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26057..27427
DNA (1371bp) protein (457aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
tRNA modification GTPase MnmE n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW58_9FIRM
mnmE; tRNA modification GTPase MnmE
Displaying items 1-30 of 32 in total

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