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L3_098_000M1_scaffold_621

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_621_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(341..640)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ88_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS15037.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_098_000M1_scaffold_621_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(656..1633)
DNA (978bp) protein (326aa)
DnaJ domain protein n=2 Tax=Bacteroides RepID=B0NQ87_BACSE
DnaJ domain protein {ECO:0000313|EMBL:EDS15036.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
molecular chaperone DnaJ
L3_098_000M1_scaffold_621_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1945..4473
DNA (2529bp) protein (843aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YKB5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH18123.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
polysaccharide deacetylase
L3_098_000M1_scaffold_621_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4642..5664)
DNA (1023bp) protein (341aa)
L-threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y5A7_BACSE
Threonine aldolase {ECO:0000313|EMBL:EPH18124.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_098_000M1_scaffold_621_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5796..7433)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=5 Tax=Bacteroides RepID=B0NQ84_BACSE
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
molecular chaperone GroEL
L3_098_000M1_scaffold_621_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7475..7747)
DNA (273bp) protein (91aa)
10 kDa chaperonin n=15 Tax=Bacteroides RepID=A7V0P9_BACUN
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Chaperonin Cpn10
L3_098_000M1_scaffold_621_7
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7964..9466)
DNA (1503bp) protein (501aa)
Glutamate--ammonia ligase, catalytic domain protein n=3 Tax=Bacteroides RepID=B0NQ81_BACSE
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CDA49254.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
glutamine synthetase
L3_098_000M1_scaffold_621_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9658..9816)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ80_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS15029.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_098_000M1_scaffold_621_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9945..11306)
DNA (1362bp) protein (454aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ79_BACSE
L3_098_000M1_scaffold_621_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11431..12126)
DNA (696bp) protein (232aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=S3ZBI7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH18130.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
peptidase membrane zinc metallopeptidase
L3_098_000M1_scaffold_621_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12305..13609)
DNA (1305bp) protein (435aa)
Alpha-L-fucosidase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ77_BACSE
Alpha-L-fucosidase {ECO:0000313|EMBL:EDS15026.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
glycoside hydrolase 29 (alpha-L-fucosidase)
L3_098_000M1_scaffold_621_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13716..14984)
DNA (1269bp) protein (423aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Bacteroides RepID=B0NQ76_BACSE
L3_098_000M1_scaffold_621_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14981..15469)
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=3 Tax=Bacteroides RepID=B0NQ75_BACSE
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDS15024.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
ferric uptake regulator, Fur family
L3_098_000M1_scaffold_621_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15592..16254)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6ARR8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EPH18134.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_098_000M1_scaffold_621_15
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16458..18566)
DNA (2109bp) protein (703aa)
peptidase 3 (EC:3.4.14.4)
Peptidase family M49 n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ADZ4_9BACE
Peptidase family M49 {ECO:0000313|EMBL:CDA49245.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_098_000M1_scaffold_621_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18607..19071)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6AKC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49244.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative AraC-family regulatory protein
L3_098_000M1_scaffold_621_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19355..21169
DNA (1815bp) protein (605aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y8W3_BACSE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EPH18137.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_098_000M1_scaffold_621_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21293..22144)
DNA (852bp) protein (284aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ70_BACSE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS15019.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_098_000M1_scaffold_621_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22371..23321)
DNA (951bp) protein (317aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Bacteroides stercoris RepID=B0NQ68_BACSE
L3_098_000M1_scaffold_621_20
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23459..24517)
DNA (1059bp) protein (353aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=3 Tax=Bacteroides RepID=B0NQ67_BACSE
L3_098_000M1_scaffold_621_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24523..24768)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NQ66_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH18141.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_098_000M1_scaffold_621_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24780..26321)
DNA (1542bp) protein (514aa)
(R)-citramalate synthase (EC:2.3.1.182)
LeuA allosteric (Dimerization) domain protein n=2 Tax=Bacteroides RepID=B0NQ65_BACSE
LeuA allosteric (Dimerization) domain protein {ECO:0000313|EMBL:EDS15014.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_098_000M1_scaffold_621_23
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26311..26904)
DNA (594bp) protein (198aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
leuD; putative 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ADY9_9BACE
L3_098_000M1_scaffold_621_24
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27108..27752)
DNA (645bp) protein (215aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ63_BACSE
L3_098_000M1_scaffold_621_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27700..28428)
DNA (729bp) protein (243aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ63_BACSE
L3_098_000M1_scaffold_621_26
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28461..29900)
DNA (1440bp) protein (480aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=2 Tax=Bacteroides RepID=R6ABD1_9BACE
L3_098_000M1_scaffold_621_27
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30271..30519)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NQ61_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49230.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
lipoprotein
Displaying 27 items

View Taxonomy