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L3_098_000M1_scaffold_998

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_998_1
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(70..456)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=6 Tax=Bacteroides RepID=B0NWB7_BACSE
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
30S ribosomal protein S9
L3_098_000M1_scaffold_998_2
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(467..919)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI0003724C18
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
50S ribosomal protein L13
L3_098_000M1_scaffold_998_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(930..1397)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NWC1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13623.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_098_000M1_scaffold_998_4
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1578..2981)
DNA (1404bp) protein (468aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Asparagine--tRNA ligase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AL73_9BACE
asnS; asparaginyl-trna synthetase
L3_098_000M1_scaffold_998_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3012..4478)
DNA (1467bp) protein (489aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
ribosomal large subunit pseudouridine synthase B n=1 Tax=Bacteroides gallinarum RepID=UPI00037EC09C
RNA-binding S4 domain protein
L3_098_000M1_scaffold_998_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4610..5956)
DNA (1347bp) protein (449aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=2 Tax=Bacteroides stercoris RepID=B0NWC5_BACSE
L3_098_000M1_scaffold_998_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6220..6360)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGR8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20812.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_098_000M1_scaffold_998_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6357..6665)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YT79_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20813.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
nucleotidyltransferase domain-containing protein
L3_098_000M1_scaffold_998_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6667..7104)
DNA (438bp) protein (146aa)
Nucleotidyltransferase substrate-binding family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D079_BACPM
Nucleotidyltransferase substrate-binding family protein {ECO:0000313|EMBL:EDY95293.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
nucleotidyltransferase substrate-binding family protein
L3_098_000M1_scaffold_998_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7133..7489)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D080_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95294.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_098_000M1_scaffold_998_11
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7502..7894)
DNA (393bp) protein (131aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D081_BACPM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDY95295.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_098_000M1_scaffold_998_12
unknown

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7918..8052
DNA (135bp) protein (45aa)

This feature has no annotations

L3_098_000M1_scaffold_998_13
unknown

Not on your lists

8106..8438
DNA (333bp) protein (111aa)

This feature has no annotations

L3_098_000M1_scaffold_998_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8480..8704
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LAC7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42641.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_000M1_scaffold_998_15
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8762..9022
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D083_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95297.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_098_000M1_scaffold_998_16
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9000..9386
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UV10_9BACE
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY95298.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
putative DNA binding protein
L3_098_000M1_scaffold_998_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9462..9764
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B5D085_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EFV67048.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_098_000M1_scaffold_998_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9761..9991
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D086_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95300.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_098_000M1_scaffold_998_19
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10002..10961
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UV07_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV67046.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_098_000M1_scaffold_998_20
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10980..11873
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D088_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95302.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_098_000M1_scaffold_998_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11907..12182
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCU1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20824.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_098_000M1_scaffold_998_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12182..12838
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZJD4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20825.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_098_000M1_scaffold_998_23
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12860..13285
DNA (426bp) protein (142aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B5D090_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95304.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_098_000M1_scaffold_998_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13279..13476
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGT5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20827.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_098_000M1_scaffold_998_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13457..14062
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UV02_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV67041.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_098_000M1_scaffold_998_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14115..15794
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCU7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20829.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_098_000M1_scaffold_998_27
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15950..16615
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZJE1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDY95311.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Domain of unknown function (DUF3560).
L3_098_000M1_scaffold_998_28
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16582..16713
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JGE9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49192.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_098_000M1_scaffold_998_29
unknown

Not on your lists

16813..17007
DNA (195bp) protein (65aa)

This feature has no annotations

L3_098_000M1_scaffold_998_30
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17004..17375
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9EI11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY29591.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
Displaying items 1-30 of 44 in total

View Taxonomy