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L3_098_000M1_scaffold_1164

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_1164_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..980)
DNA (978bp) protein (326aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Membrane-associated zinc metalloprotease n=5 Tax=Bacteroides RepID=A6L0W9_BACV8
membrane-associated zinc metalloprotease
L3_098_000M1_scaffold_1164_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1037..2185)
DNA (1149bp) protein (383aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=8 Tax=root RepID=DXR_BACV8
L3_098_000M1_scaffold_1164_3
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2193..3050)
DNA (858bp) protein (286aa)
Peptidase, M23 family n=11 Tax=Bacteroides RepID=C3Q7A0_9BACE
membrane peptidase
Putative uncharacterized protein {ECO:0000313|EMBL:EEB27239.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_098_000M1_scaffold_1164_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3069..3587)
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM n=6 Tax=Bacteroides RepID=C6ZAG7_9BACE
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
16S rRNA processing protein RimM
L3_098_000M1_scaffold_1164_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3599..4903)
DNA (1305bp) protein (435aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H920_BACVU
L3_098_000M1_scaffold_1164_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4922..5548)
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L0W4_BACV8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG19418.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_098_000M1_scaffold_1164_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5595..6284)
DNA (690bp) protein (230aa)
Universal bacterial protein YeaZ n=7 Tax=Bacteroides RepID=C6ZAH0_9BACE
glycoprotease
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EIY72838.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_000M1_scaffold_1164_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6359..7255
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L0W2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39326.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_098_000M1_scaffold_1164_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7302..7871
DNA (570bp) protein (190aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Guanylate kinase n=7 Tax=Bacteroides RepID=A6L0W1_BACV8
L3_098_000M1_scaffold_1164_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7876..8058
DNA (183bp) protein (61aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q792_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17522.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_000M1_scaffold_1164_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8040..8612
DNA (573bp) protein (191aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=4 Tax=Bacteroides RepID=C6ZAH4_9BACE
L3_098_000M1_scaffold_1164_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8695..9165)
DNA (471bp) protein (157aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6ZAH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR97627.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_098_000M1_scaffold_1164_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9393..10232)
DNA (840bp) protein (280aa)
Ser/Thr phosphatase family protein n=6 Tax=root RepID=C6ZAH6_9BACE
phosphoesterase
Uncharacterized protein {ECO:0000313|EMBL:EOR97626.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_1164_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10306..11196
DNA (891bp) protein (297aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=7 Tax=root RepID=A6L0V7_BACV8
1,4-dihydroxy-2-naphthoate octaprenyltransferase
L3_098_000M1_scaffold_1164_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11247..11729)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TTB2_BACVU
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_098_000M1_scaffold_1164_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11726..12343)
DNA (618bp) protein (206aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=7 Tax=Bacteroides RepID=A6L0V5_BACV8
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Uncharacterized protein {ECO:0000313|EMBL:EOR97623.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_1164_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12348..12998)
DNA (651bp) protein (217aa)
Redox-sensing transcriptional repressor Rex n=8 Tax=root RepID=A6L0V4_BACV8
redox-sensing transcriptional repressor Rex
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_1164_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13116..13454
DNA (339bp) protein (113aa)
Uncharacterized protein n=7 Tax=root RepID=R7NXR8_9BACE
translation initiation factor SUI1
Uncharacterized protein {ECO:0000313|EMBL:CDF17530.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_000M1_scaffold_1164_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13513..14502)
DNA (990bp) protein (330aa)
Elongation factor Ts n=8 Tax=root RepID=EFTS_BACV8
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_000M1_scaffold_1164_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14635..15474)
DNA (840bp) protein (280aa)
30S ribosomal protein S2 n=8 Tax=Bacteroides RepID=RS2_BACV8
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_000M1_scaffold_1164_21
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15607..15993)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=13 Tax=Bacteroides RepID=RS9_BACV8
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L3_098_000M1_scaffold_1164_22
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(16000..16218)
DNA (219bp) protein (73aa)
50S ribosomal protein L13 n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1KA22_9BACE
ribosomal protein L13 suspected. See adjacent gene [L3_098_000M1_scaffold_1164_23].
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_098_000M1_scaffold_1164_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(16157..16405)
DNA (249bp) protein (83aa)
50S ribosomal protein L13 n=14 Tax=Bacteroides RepID=A6L0U9_BACV8
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_000M1_scaffold_1164_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16705..16950)
DNA (246bp) protein (82aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6ZAI7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS30352.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_098_000M1_scaffold_1164_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16940..17515)
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L0U7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR97615.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_000M1_scaffold_1164_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17876..18370)
DNA (495bp) protein (165aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L0U6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS55269.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_000M1_scaffold_1164_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18533..19936)
DNA (1404bp) protein (468aa)
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00534}; EC=6.1.1.22 {ECO:0000255|HAMAP-Rule:MF_00534};; Asparaginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00534}; Short=AsnRS {ECO:0000255|HAMAP-Rule:MF_00534};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Asparagine--tRNA ligase n=4 Tax=Bacteroides RepID=SYN_BACV8
L3_098_000M1_scaffold_1164_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19959..21425)
DNA (1467bp) protein (489aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Pseudouridine synthase n=2 Tax=Bacteroides vulgatus RepID=D4V403_BACVU
ribosomal large subunit pseudouridine synthase B
L3_098_000M1_scaffold_1164_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21501..22847)
DNA (1347bp) protein (449aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Adenylosuccinate lyase n=6 Tax=Bacteroides RepID=A6L0U3_BACV8
L3_098_000M1_scaffold_1164_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22941..24080)
DNA (1140bp) protein (380aa)
MATE efflux family protein n=2 Tax=Bacteroides vulgatus RepID=D4V401_BACVU
transmembrane transport efflux protein
MATE efflux family protein {ECO:0000313|EMBL:KDS55273.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Displaying items 1-30 of 33 in total

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