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L3_098_000M1_scaffold_386

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_386_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..986
DNA (984bp) protein (328aa)
Mate efflux family protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8F9_9FIRM
Mate efflux family protein {ECO:0000313|EMBL:EFW05671.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
mate efflux family protein
L3_098_000M1_scaffold_386_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1058..1594
DNA (537bp) protein (179aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8G0_9FIRM
L3_098_000M1_scaffold_386_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1617..2168
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7G8G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05673.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
phosphoesterase
L3_098_000M1_scaffold_386_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2190..2369
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05674.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_386_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2945..3571
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06003.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ATPases involved in chromosome partitioning
L3_098_000M1_scaffold_386_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4406..7900
DNA (3495bp) protein (1165aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Clostridiales RepID=R5TJE0_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CCZ65810.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
cell wall surface anchor family protein
L3_098_000M1_scaffold_386_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7920..8081
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P29 RepID=T4NKJ6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX77085.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_098_000M1_scaffold_386_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9154..10554
DNA (1401bp) protein (467aa)
Uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YEH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65617.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
zinc finger SWIM domain-containing protein
L3_098_000M1_scaffold_386_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10567..12513
DNA (1947bp) protein (649aa)
Uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66333.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_098_000M1_scaffold_386_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12514..13602
DNA (1089bp) protein (363aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCE9_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEF66334.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ATPase
L3_098_000M1_scaffold_386_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13602..15800
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66335.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_098_000M1_scaffold_386_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15800..16948
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66336.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_098_000M1_scaffold_386_13
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17010..18278
DNA (1269bp) protein (423aa)
Ribonuclease Z {ECO:0000313|EMBL:CDL92443.1}; EC=3.1.26.11 {ECO:0000313|EMBL:CDL92443.1};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
beta-lactamase n=1 Tax=Clostridium tyrobutyricum RepID=UPI000377DCF4
Metal-dependent hydrolases of the beta-lactamase superfamily III
L3_098_000M1_scaffold_386_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18302..19000)
DNA (699bp) protein (233aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8I3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EFW05695.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Transcriptional regulator, GntR family protein
L3_098_000M1_scaffold_386_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19202..25918
DNA (6717bp) protein (2239aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N539_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EDS18791.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
gluA; protein GluA
L3_098_000M1_scaffold_386_16
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25995..27230)
DNA (1236bp) protein (412aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFY08954.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFY08954.1};; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae ATCC 19414.;"
Aminotransferase, class I/II n=2 Tax=Firmicutes RepID=E7FVN4_ERYRH
class I and II aminotransferase
L3_098_000M1_scaffold_386_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27311..27631
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05702.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_386_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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27618..29222
DNA (1605bp) protein (535aa)
ABC1 family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C080_9FIRM
ABC1 family protein {ECO:0000313|EMBL:EDS75570.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Predicted unusual protein kinase
L3_098_000M1_scaffold_386_19
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29357..29977)
DNA (621bp) protein (207aa)
CRP/FNR family transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8J8_9FIRM
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:EFW05637.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
CRP/FNR family transcriptional regulator
L3_098_000M1_scaffold_386_20
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30064..30912
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7G8J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05638.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_386_21
Caenorhabditis japonica, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(31020..31274)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2WNA7_CAEJA
hypothetical protein
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:CJA18083}; TaxID=281687 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis japonica.;"
L3_098_000M1_scaffold_386_22
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31274..31978)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05642.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_386_23
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32016..32498)
DNA (483bp) protein (161aa)
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8K4_9FIRM
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:EFW05643.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
G:T/U mismatch-specific DNA glycosylase
L3_098_000M1_scaffold_386_24
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32789..33442
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8K5_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Predicted membrane protein
L3_098_000M1_scaffold_386_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33455..33913
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05645.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Pyridoxamine 5'-phosphate oxidase.
L3_098_000M1_scaffold_386_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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34018..35340
DNA (1323bp) protein (441aa)
Guanine-hypoxanthine permease n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8K7_9FIRM
Guanine-hypoxanthine permease {ECO:0000313|EMBL:EFW05646.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
xanthine/uracil/vitamin C permease
L3_098_000M1_scaffold_386_27
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

35510..37024
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05647.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
cell envelope-related transcriptional attenuator
L3_098_000M1_scaffold_386_28
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

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37337..38299
DNA (963bp) protein (321aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Coprobacillus sp. D6 RepID=UPI000316E902
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:CDD51642.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
Displaying 28 items

View Taxonomy