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L3_098_000M1_scaffold_552

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_552_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(192..1475)
DNA (1284bp) protein (428aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Glucose-6-phosphate isomerase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFG3_9FIRM
pgi; fused S1 RNA-binding domain and glucose-6-phosphate isomerase
L3_098_000M1_scaffold_552_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1472..1846)
DNA (375bp) protein (125aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFG4_9FIRM
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:EFW03225.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
general stress protein 13
L3_098_000M1_scaffold_552_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1971..2195
DNA (225bp) protein (75aa)
Fe/S-biogenesis protein NfuA n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFG5_9FIRM
Fe/S-biogenesis protein NfuA {ECO:0000313|EMBL:EFW03226.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
nfuA; Fe/S biogenesis protein NfuA
L3_098_000M1_scaffold_552_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2195..2611
DNA (417bp) protein (139aa)
Large-conductance mechanosensitive channel n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFG6_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
mscL; large-conductance mechanosensitive channel
L3_098_000M1_scaffold_552_5
unknown

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2765..2890
DNA (126bp) protein (42aa)

This feature has no annotations

L3_098_000M1_scaffold_552_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3052..4194
DNA (1143bp) protein (381aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
S-adenosylmethionine synthase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFG7_9FIRM
metK; S-adenosylmethionine synthetase
L3_098_000M1_scaffold_552_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4287..4817
DNA (531bp) protein (177aa)
30S ribosomal interface protein S30EA n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFG8_9FIRM
30S ribosomal interface protein S30EA {ECO:0000313|EMBL:EFW03229.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ribosomal subunit interface protein
L3_098_000M1_scaffold_552_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4846..5778)
DNA (933bp) protein (311aa)
Fe-S oxidoreductase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFG9_9FIRM
Fe-S oxidoreductase {ECO:0000313|EMBL:EFW03230.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative oxidoreductase, Fe-S subunit
L3_098_000M1_scaffold_552_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5818..7596
DNA (1779bp) protein (593aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GFH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03231.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative drug ABC exporter ATP-binding protein/permease
L3_098_000M1_scaffold_552_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7599..9452
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03232.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative drug ABC exporter ATP-binding protein/permease
L3_098_000M1_scaffold_552_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9802..12198
DNA (2397bp) protein (799aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFH2_9FIRM
L3_098_000M1_scaffold_552_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12452..13015
DNA (564bp) protein (188aa)
Acetyltransferase, GNAT family n=4 Tax=Clostridiales RepID=A7B363_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49355.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GCN5-like N-acetyltransferase
L3_098_000M1_scaffold_552_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13070..14029)
DNA (960bp) protein (320aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1D6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS75191.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Site-specific recombinase XerC
L3_098_000M1_scaffold_552_14
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14120..14806
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KP54_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41716.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000M1_scaffold_552_15
unknown

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14841..16007
DNA (1167bp) protein (389aa)

This feature has no annotations

L3_098_000M1_scaffold_552_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16231..16836
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFH7_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
rpsD; 30S ribosomal protein S4
L3_098_000M1_scaffold_552_17
unknown

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16844..16990
DNA (147bp) protein (49aa)

This feature has no annotations

L3_098_000M1_scaffold_552_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17106..18911
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03239.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
septation ring formation regulator EzrA
L3_098_000M1_scaffold_552_19
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18981..20120
DNA (1140bp) protein (380aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFH9_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:EFW03240.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_552_20
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20125..21321
DNA (1197bp) protein (399aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
hypothetical protein n=1 Tax=Coprobacillus sp. D6 RepID=UPI0002FE005A
thiazole biosynthesis/tRNA modification protein ThiI
L3_098_000M1_scaffold_552_21
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21380..21595
DNA (216bp) protein (72aa)
Small acid-soluble spore protein alpha/beta type n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFI2_9FIRM
Small acid-soluble spore protein alpha/beta type {ECO:0000313|EMBL:EFW03243.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
sspA; small acid-soluble spore protein
L3_098_000M1_scaffold_552_22
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21732..22928
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ackA; acetate kinase AckA (EC:2.7.2.1)
Acetate kinase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFI3_9FIRM
L3_098_000M1_scaffold_552_23
unknown

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22992..25178
DNA (2187bp) protein (729aa)

This feature has no annotations

L3_098_000M1_scaffold_552_24
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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25274..26197
DNA (924bp) protein (308aa)
Phosphoesterase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFI4_9FIRM
Phosphoesterase {ECO:0000313|EMBL:EFW03245.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
oligoribonuclease
L3_098_000M1_scaffold_552_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26190..27845
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03246.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_552_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27865..29721
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03247.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
Displaying 26 items

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