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L3_098_000M1_scaffold_607

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_607_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..983)
DNA (981bp) protein (327aa)
Transcription accessory protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GC62_9FIRM
Transcription accessory protein {ECO:0000313|EMBL:EFW04071.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Tex protein-related transcription accessory protein (S1 RNA binding domain)
L3_098_000M1_scaffold_607_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1760..3130)
DNA (1371bp) protein (457aa)
Dipeptidase pepV n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GGA4_9FIRM
Dipeptidase pepV {ECO:0000313|EMBL:EFW02948.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Xaa-His dipeptidase
L3_098_000M1_scaffold_607_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3198..3662
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GGA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW02947.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
NUDIX hydrolase
L3_098_000M1_scaffold_607_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3707..5119)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GGA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW02945.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_607_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5136..7001)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GGA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW02944.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
cell wall binding repeat-containing protein/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
L3_098_000M1_scaffold_607_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7140..8072)
DNA (933bp) protein (311aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Homoserine O-succinyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG99_9FIRM
homoserine O-succinyltransferase
L3_098_000M1_scaffold_607_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8171..8797
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW02942.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_607_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8794..10017)
DNA (1224bp) protein (408aa)
Metal-dependent phosphohydrolase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG97_9FIRM
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:EFW02941.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_098_000M1_scaffold_607_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10066..10533
DNA (468bp) protein (156aa)
Methionine-(R)-sulfoxide reductase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG96_9FIRM
Methionine-(R)-sulfoxide reductase {ECO:0000313|EMBL:EFW02940.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ytsP; protein YtsP
L3_098_000M1_scaffold_607_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10556..10984)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWL2_9CLOT
CheW-like protein {ECO:0000313|EMBL:EEG54100.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_098_000M1_scaffold_607_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10984..12912)
DNA (1929bp) protein (643aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Putative chemotaxis protein CheA n=1 Tax=Clostridium sp. D5 RepID=F0YWL1_9CLOT
cheA; chemotaxis protein CheA
L3_098_000M1_scaffold_607_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12924..13889)
DNA (966bp) protein (322aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CTH3_9CLOT
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI70631.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
chemosensory protein
L3_098_000M1_scaffold_607_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13873..14343)
DNA (471bp) protein (157aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG04_9FIRM
CheD, stimulates methylation of MCP protein
L3_098_000M1_scaffold_607_14
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14353..14970)
DNA (618bp) protein (206aa)
CheY-P phosphatase CheC {ECO:0000313|EMBL:KJJ73362.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJJ73362.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJK3_9CLOT
CheC, inhibitor of MCP methylation
L3_098_000M1_scaffold_607_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14970..17021)
DNA (2052bp) protein (684aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98430.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
methyl-accepting chemotaxis protein
L3_098_000M1_scaffold_607_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17024..17839)
DNA (816bp) protein (272aa)
cheR2; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34414.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_098_000M1_scaffold_607_17
unknown

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comp(17851..18216)
DNA (366bp) protein (122aa)

This feature has no annotations

L3_098_000M1_scaffold_607_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18219..20492)
DNA (2274bp) protein (758aa)
Diguanylate cyclase domain protein n=7 Tax=Clostridium difficile RepID=G6BY80_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EHJ32929.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
signaling protein
L3_098_000M1_scaffold_607_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20512..21873)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FC05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97731.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_098_000M1_scaffold_607_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21883..23160)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YPK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13918.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_098_000M1_scaffold_607_21
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23328..24641
DNA (1314bp) protein (438aa)
ATPase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GCG7_9FIRM
ATPase {ECO:0000313|EMBL:EFW04176.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
recombination factor protein RarA
L3_098_000M1_scaffold_607_22
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24664..25845)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47963.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
SARP family transcriptional regulator
L3_098_000M1_scaffold_607_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25989..27044)
DNA (1056bp) protein (352aa)
Twitching motility protein n=5 Tax=Erysipelotrichaceae RepID=B0N3Y4_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EDS19156.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
pilus retraction protein PilT
L3_098_000M1_scaffold_607_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27034..27429)
DNA (396bp) protein (132aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47961.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_098_000M1_scaffold_607_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27419..27787)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06627.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_607_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27799..28023)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06626.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Displaying 26 items

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