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L3_098_000M1_scaffold_608

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_608_1
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(280..1482)
DNA (1203bp) protein (401aa)
threonine dehydratase n=1 Tax=Coprobacillus sp. D6 RepID=UPI0003128051
Threonine ammonia-lyase {ECO:0000313|EMBL:CDE28238.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
threonine dehydratase
L3_098_000M1_scaffold_608_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1530..1703)
DNA (174bp) protein (58aa)
Heat-shock protein 101 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBK4_9FIRM
Heat-shock protein 101 {ECO:0000313|EMBL:EFW04574.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_608_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1703..2521)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04573.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
cof family hydrolase
L3_098_000M1_scaffold_608_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2558..3385)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04572.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_608_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3446..4744
DNA (1299bp) protein (433aa)
Na+ driven multidrug efflux pump n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBK1_9FIRM
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:EFW04571.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
mate efflux family protein
L3_098_000M1_scaffold_608_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4763..7186)
DNA (2424bp) protein (808aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04570.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
signaling protein
L3_098_000M1_scaffold_608_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7392..7835)
DNA (444bp) protein (148aa)
UPF0178 protein HMPREF9488_02140 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBJ9_9FIRM
UPF0178 protein HMPREF9488_02140 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_608_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7832..8404)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GBJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04568.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Rhomboid family protein
L3_098_000M1_scaffold_608_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8391..9185)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04567.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
carbohydrate binding domain protein
L3_098_000M1_scaffold_608_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9336..10775)
DNA (1440bp) protein (480aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Glutamate--tRNA ligase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBJ0_9FIRM
gltX; glutamyl-tRNA synthetase
L3_098_000M1_scaffold_608_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10776..11258)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBI9_9FIRM
L3_098_000M1_scaffold_608_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11338..12741)
DNA (1404bp) protein (468aa)
VanZ-like protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C451_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EDS74435.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Glycopeptide antibiotics resistance protein
L3_098_000M1_scaffold_608_13
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12792..13463)
DNA (672bp) protein (224aa)
spoT; GTP pyrophosphokinase SpoT (EC:2.7.6.5)
RelA/SpoT domain-containing protein n=2 Tax=Coprobacillus RepID=E7GBI8_9FIRM
RelA/SpoT domain-containing protein {ECO:0000313|EMBL:EFW04558.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_608_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13499..14215
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GBI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04721.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_608_15
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14184..15194)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04720.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Predicted transcriptional regulators
L3_098_000M1_scaffold_608_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15259..16257)
DNA (999bp) protein (333aa)
Oxidoreductase domain-containing protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBI4_9FIRM
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EFW04719.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
oxidoreductase domain-containing protein
L3_098_000M1_scaffold_608_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16302..17150)
DNA (849bp) protein (283aa)
HAD phosphatase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBI2_9FIRM
HAD phosphatase {ECO:0000313|EMBL:EFW04717.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
cof family hydrolase
L3_098_000M1_scaffold_608_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17241..17894)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04716.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_608_19
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17907..18653)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04715.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L3_098_000M1_scaffold_608_20
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18654..19049)
DNA (396bp) protein (132aa)
ArsR family Transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBH9_9FIRM
ArsR family Transcriptional regulator {ECO:0000313|EMBL:EFW04714.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
bacterial regulatory , arsR family protein
L3_098_000M1_scaffold_608_21
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

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comp(19080..19253)
DNA (174bp) protein (58aa)
Acetyltransferase GNAT family n=1 Tax=Acinetobacter sp. CAG:196 RepID=R5STR8_9GAMM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCZ50166.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
acetyltransferase
L3_098_000M1_scaffold_608_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19195..19548)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44065.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
yfhA; putative acetyltransferase
L3_098_000M1_scaffold_608_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19579..20025)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R168_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93416.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_098_000M1_scaffold_608_24
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20080..21678)
DNA (1599bp) protein (533aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
CTP synthase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBH5_9FIRM
pyrG; CTP synthetase
L3_098_000M1_scaffold_608_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21922..22617
DNA (696bp) protein (232aa)
Two-component system response regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBH4_9FIRM
Two-component system response regulator {ECO:0000313|EMBL:EFW04709.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_098_000M1_scaffold_608_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22614..23738
DNA (1125bp) protein (375aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBH3_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_098_000M1_scaffold_608_27
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23761..24804)
DNA (1044bp) protein (348aa)
rubrerythrin n=2 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB9F
Rubrerythrin {ECO:0000313|EMBL:EHQ91664.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
rubrerythrin
L3_098_000M1_scaffold_608_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24801..25457)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002EE469A
Rubredoxin {ECO:0000313|EMBL:EFC99996.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
rubredoxin
L3_098_000M1_scaffold_608_29
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(25537..26160)
DNA (624bp) protein (208aa)
Flavin reductase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBH2_9FIRM
Flavin reductase {ECO:0000313|EMBL:EFW04707.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
flavin reductase domain-containing protein
L3_098_000M1_scaffold_608_30
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26323..27606
DNA (1284bp) protein (428aa)
Aspartate aminotransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBH1_9FIRM
Aspartate aminotransferase {ECO:0000313|EMBL:EFW04706.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
aspartate aminotransferase
Displaying 30 items

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