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L3_098_000M1_scaffold_905

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_905_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..1094
DNA (1092bp) protein (364aa)
Carbamoylphosphate synthase large subunit n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFS4_9FIRM
Carbamoylphosphate synthase large subunit {ECO:0000313|EMBL:EFW03138.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Biotin carboxylase
L3_098_000M1_scaffold_905_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1109..1864
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03137.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
esterase
L3_098_000M1_scaffold_905_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1866..3074
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03136.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Biotin carboxylase
L3_098_000M1_scaffold_905_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3227..6043
DNA (2817bp) protein (939aa)
PAS domain S-box protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WC64_CLOIN
PAS domain S-box protein {ECO:0000313|EMBL:ENY85072.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_098_000M1_scaffold_905_5
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6932..8902
DNA (1971bp) protein (657aa)
Membrane protein, putative n=1 Tax=Clostridium novyi (strain NT) RepID=A0PY17_CLONN
Uncharacterized protein {ECO:0000313|EMBL:KGM95188.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
hypothetical protein
L3_098_000M1_scaffold_905_6
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8902..9741
DNA (840bp) protein (280aa)
ABC transporter , ATP-binding protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0PY18_CLONN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM95187.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
ABC transporter ATP-binding protein
L3_098_000M1_scaffold_905_7
unknown

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9738..10370
DNA (633bp) protein (211aa)

This feature has no annotations

L3_098_000M1_scaffold_905_8
unknown

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10380..10745
DNA (366bp) protein (122aa)

This feature has no annotations

L3_098_000M1_scaffold_905_9
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(11061..12176)
DNA (1116bp) protein (372aa)
Sugar isomerase (SIS) n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZIM4_9ACTN
Sugar isomerase (SIS) {ECO:0000313|EMBL:CDD40826.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
sugar isomerase (SIS)
L3_098_000M1_scaffold_905_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12385..13059
DNA (675bp) protein (225aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Deoxyribose-phosphate aldolase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCR8_9FIRM
hypothetical protein
L3_098_000M1_scaffold_905_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13087..14439)
DNA (1353bp) protein (451aa)
Magnesium transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFS1_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
magnesium transporter
L3_098_000M1_scaffold_905_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14654..15694
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003822A1D
Uncharacterized protein {ECO:0000313|EMBL:CCZ24749.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_098_000M1_scaffold_905_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15678..16568
DNA (891bp) protein (297aa)
PHP domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N952_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45586.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Predicted metal-dependent phosphoesterases (PHP family)
L3_098_000M1_scaffold_905_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16922..18397
DNA (1476bp) protein (492aa)
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDX8_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFW03781.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_905_15
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18397..18648
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03134.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_905_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18660..19586
DNA (927bp) protein (309aa)
Auxin efflux carrier n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFR9_9FIRM
Auxin efflux carrier {ECO:0000313|EMBL:EFW03133.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative auxin efflux carrier
L3_098_000M1_scaffold_905_17
unknown

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19648..20430
DNA (783bp) protein (261aa)

This feature has no annotations

Displaying 17 items

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