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L3_098_000M1_scaffold_935

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_935_1
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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140..991
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EVD0_CLOSG
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHN16961.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
L3_098_000M1_scaffold_935_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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1152..1718
DNA (567bp) protein (189aa)
Putative dihydroxyacetone kinase regulator n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6ML40_9FIRM
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:CDB86517.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
transcriptional regulator
L3_098_000M1_scaffold_935_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1905..3260
DNA (1356bp) protein (452aa)
Radical SAM domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBR7_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EET61870.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_098_000M1_scaffold_935_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3326..4189
DNA (864bp) protein (288aa)
EDD domain protein, DegV family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBR8_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EET61871.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
EDD domain protein, DegV family
L3_098_000M1_scaffold_935_5
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4212..5378
DNA (1167bp) protein (389aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
metK1; S-adenosylmethionine synthase MetK (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5G178_9ACTN
L3_098_000M1_scaffold_935_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5386..5976
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0ML89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01495.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_098_000M1_scaffold_935_7
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6136..8052
DNA (1917bp) protein (639aa)
PTS system sucrose-specific IIBC component {ECO:0000313|EMBL:EEA85308.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEA85308.1};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
PTS system sucrose-specific IIBC component n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYS7_9FIRM
PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12)
L3_098_000M1_scaffold_935_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8021..9499
DNA (1479bp) protein (493aa)
beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB9_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EEA80412.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_098_000M1_scaffold_935_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9510..10451
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05701.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transcriptional regulator, AraC family
L3_098_000M1_scaffold_935_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10472..10732
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05700.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_935_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10733..11200
DNA (468bp) protein (156aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8I7_9FIRM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFW05699.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
lactoylglutathione lyase-like lyase
L3_098_000M1_scaffold_935_12
Leptotrichia hofstadii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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11202..11516
DNA (315bp) protein (105aa)
competence protein TfoX n=1 Tax=Leptotrichia wadei RepID=UPI00036F46AE
regulator of competence-specific genes
TfoX N-terminal domain protein {ECO:0000313|EMBL:EEX74873.1}; TaxID=634994 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia hofstadii F0254.;"
L3_098_000M1_scaffold_935_13
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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11592..11972
DNA (381bp) protein (127aa)
Helicase putative RecD/TraA family n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NHP3_9MOLU
Helicase putative RecD/TraA family {ECO:0000313|EMBL:CDF12240.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
hypothetical protein
L3_098_000M1_scaffold_935_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11965..12306
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N4F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18557.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_098_000M1_scaffold_935_15
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12323..12673
DNA (351bp) protein (117aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MXS0_9CLOT
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AGF59326.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_000M1_scaffold_935_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12726..13331
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03006.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000M1_scaffold_935_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13413..14921
DNA (1509bp) protein (503aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
Fe-hydrogenase large subunit family protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFV9_9FIRM
Fe-hydrogenase large subunit family protein {ECO:0000313|EMBL:EFW03005.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_935_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14925..15122
DNA (198bp) protein (66aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N346_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36754.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_098_000M1_scaffold_935_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15201..16574
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ARA6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHQ44736.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
putative efflux protein, MATE family
L3_098_000M1_scaffold_935_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16644..18155
DNA (1512bp) protein (504aa)
ImpB/MucB/SamB family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N556_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EDS18224.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_098_000M1_scaffold_935_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18152..18562
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RKH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46649.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
YolD-like protein.
L3_098_000M1_scaffold_935_22
unknown

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18752..19666
DNA (915bp) protein (305aa)

This feature has no annotations

Displaying 22 items

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