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L3_098_000M1_scaffold_969

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_969_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(167..3862)
DNA (3696bp) protein (1232aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ2_9FIRM
rpoC; DNA-directed RNA polymerase subunit beta'
L3_098_000M1_scaffold_969_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3876..7538)
DNA (3663bp) protein (1221aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ3_9FIRM
rpoB; DNA-directed RNA polymerase subunit beta
L3_098_000M1_scaffold_969_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7645..8298)
DNA (654bp) protein (218aa)
16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ4_9FIRM
16S rRNA m(2)G 1207 methyltransferase {ECO:0000313|EMBL:EFW03707.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
methyltransferase small superfamily protein
L3_098_000M1_scaffold_969_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8354..8728)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ5_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
LSU ribosomal protein L12P
L3_098_000M1_scaffold_969_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8760..9278)
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ6_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
rplJ; 50S ribosomal protein L10
L3_098_000M1_scaffold_969_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9446..10129)
DNA (684bp) protein (228aa)
50S ribosomal protein L1 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ7_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
rplA; 50S ribosomal protein L1
L3_098_000M1_scaffold_969_7
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10153..10572)
DNA (420bp) protein (140aa)
50S ribosomal protein L11 n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GP52_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
LSU ribosomal protein L11P
L3_098_000M1_scaffold_969_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10752..11309)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDQ9_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transcription antitermination protein NusG
L3_098_000M1_scaffold_969_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11311..11499)
DNA (189bp) protein (63aa)
Protein translocase subunit SecE n=2 Tax=Coprobacillus RepID=E7GDR0_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_969_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11698..12312)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03715.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative RNA polymerase sigma factor
L3_098_000M1_scaffold_969_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12330..13058)
DNA (729bp) protein (243aa)
23S rRNA methyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR3_9FIRM
23S rRNA methyltransferase {ECO:0000313|EMBL:EFW03716.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
TrmH family RNA methyltransferase
L3_098_000M1_scaffold_969_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13088..13480)
DNA (393bp) protein (131aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Mini-ribonuclease 3 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR4_9FIRM
ribonuclease mrnC
L3_098_000M1_scaffold_969_13
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13482..14819)
DNA (1338bp) protein (446aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Cysteine--tRNA ligase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR5_9FIRM
cysteinyl-tRNA synthetase
L3_098_000M1_scaffold_969_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15058..15582)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03719.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_969_15
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15688..17115)
DNA (1428bp) protein (476aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
glgA; glycogen/starch synthase, ADP-glucose type family protein (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR7_9FIRM
L3_098_000M1_scaffold_969_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17115..18221)
DNA (1107bp) protein (369aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR8_9FIRM
Glucose-1-phosphate adenylyltransferase {ECO:0000313|EMBL:EFW03721.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_969_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18234..19235)
DNA (1002bp) protein (334aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR9_9FIRM
Displaying 17 items

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