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L3_098_000M1_scaffold_1231

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_1231_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..256
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G627_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06678.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_098_000M1_scaffold_1231_2
unknown

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399..716
DNA (318bp) protein (106aa)

This feature has no annotations

L3_098_000M1_scaffold_1231_3
unknown

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728..1042
DNA (315bp) protein (105aa)

This feature has no annotations

L3_098_000M1_scaffold_1231_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1052..1261
DNA (210bp) protein (70aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBL6_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EFW04586.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DNA-binding protein
L3_098_000M1_scaffold_1231_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1291..1785)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TP32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73955.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_098_000M1_scaffold_1231_6
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1782..2867)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPQ6_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC68649.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_098_000M1_scaffold_1231_7
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2879..4465)
DNA (1587bp) protein (529aa)
Poly(Beta-D-mannuronate) O-acetylase AlgI {ECO:0000313|EMBL:AGC68650.1}; EC=2.3.1.- {ECO:0000313|EMBL:AGC68650.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Membrane protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKL4_CLOSH
membrane protein
L3_098_000M1_scaffold_1231_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4467..4694)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TP38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73960.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_098_000M1_scaffold_1231_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4695..6215)
DNA (1521bp) protein (507aa)
tycA; tyrocidine synthase 1 (EC:5.1.1.11)
AMP-dependent synthetase and ligase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TKP1_9FIRM
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CDC73963.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_098_000M1_scaffold_1231_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(6225..6938)
DNA (714bp) protein (238aa)
aspartate racemase (EC:5.1.1.13)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RG57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47858.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000M1_scaffold_1231_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6948..8153)
DNA (1206bp) protein (402aa)
Transglutaminase-like superfamily n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U1H3_9FIRM
Transglutaminase-like superfamily {ECO:0000313|EMBL:CDC73966.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Transglutaminase-like superfamily.
L3_098_000M1_scaffold_1231_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8302..11520)
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=5 Tax=Erysipelotrichaceae RepID=B0N4N5_9FIRM
L3_098_000M1_scaffold_1231_13
unknown

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comp(11786..12136)
DNA (351bp) protein (117aa)

This feature has no annotations

L3_098_000M1_scaffold_1231_14
unknown

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comp(12099..12839)
DNA (741bp) protein (247aa)

This feature has no annotations

L3_098_000M1_scaffold_1231_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12848..14062)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R574_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89830.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_098_000M1_scaffold_1231_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14059..14736)
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R573_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33911.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
two-component system response regulator
L3_098_000M1_scaffold_1231_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14926..15330)
DNA (405bp) protein (135aa)
Uncharacterized protein (Fragment) n=2 Tax=Coprobacillus RepID=E7G8Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05579.1}; Flags: Fragment;; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
Displaying 17 items

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