ggKbase home page

L3_098_000M1_scaffold_1507

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_1507_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..433)
DNA (432bp) protein (144aa)
Accessory protein regulator protein A n=1 Tax=Clostridium sp. D5 RepID=F0Z0Z0_9CLOT
Accessory protein regulator protein A {ECO:0000313|EMBL:EGB92092.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_098_000M1_scaffold_1507_2
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(426..1802)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23885.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_098_000M1_scaffold_1507_3
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1902..2102)
DNA (201bp) protein (67aa)
Cro/CI family transcriptional regulator n=1 Tax=Enterococcus faecium (strain Aus0004) RepID=H8L7W4_ENTFU
Cro/CI family transcriptional regulator
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:AFC63719.1}; TaxID=1155766 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (strain Aus0004).;"
L3_098_000M1_scaffold_1507_4
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2095..2460)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA PF3_9FIRM">RepID=E5VPF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15259.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_098_000M1_scaffold_1507_5
unknown

Not on your lists

2712..2801
DNA (90bp) protein (30aa)

This feature has no annotations

L3_098_000M1_scaffold_1507_6
unknown

Not on your lists

2807..3046
DNA (240bp) protein (80aa)

This feature has no annotations

L3_098_000M1_scaffold_1507_7
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3303..3563
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BNR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81761.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
L3_098_000M1_scaffold_1507_8
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3551..4060
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F4E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE45314.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
type 11 methyltransferase
L3_098_000M1_scaffold_1507_9
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4581..5009
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002E56C2D
Uncharacterized protein {ECO:0000313|EMBL:KGK81142.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
L3_098_000M1_scaffold_1507_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5121..5489
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89436.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_098_000M1_scaffold_1507_11
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5885..6145
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Paenibacillus RepID=F5LRH3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGL15041.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
hypothetical protein
L3_098_000M1_scaffold_1507_12
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6311..6835
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JG90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33244.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_098_000M1_scaffold_1507_13
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6940..7449
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I908_9CLOT
Strain B4166 NODE_198, whole genome shotgun sequence {ECO:0000313|EMBL:KIO63318.1}; Strain B4167 NODE_165, whole genome shotgun sequence {ECO:0000313|EMBL:KIO72398.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
putative Xre family DNA-binding protein
L3_098_000M1_scaffold_1507_14
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7629..8375
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83175.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L3_098_000M1_scaffold_1507_15
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8896..9846
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VV70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFA89550.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
hypothetical protein
L3_098_000M1_scaffold_1507_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

9825..10466
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33595.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Domain of unknown function (DUF1814).
L3_098_000M1_scaffold_1507_17
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10795..11124
DNA (330bp) protein (110aa)
Cupin domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDG9_9CLOT
Cupin domain protein {ECO:0000313|EMBL:EEG30455.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Cupin domain.
L3_098_000M1_scaffold_1507_18
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11207..11641
DNA (435bp) protein (145aa)
SMI1 / KNR4 n=1 Tax=Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3HBV1_BACTU
SMI1 / KNR4 family protein
SMI1 / KNR4 family protein {ECO:0000313|EMBL:AJI23994.1}; TaxID=1348623 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium NBRC 15308 = ATCC 14581.;"
L3_098_000M1_scaffold_1507_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11753..12304
DNA (552bp) protein (184aa)
Alpha/beta hydrolase fold n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SNX1_CLOC7
Alpha/beta hydrolase {ECO:0000313|EMBL:KGJ52843.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
alpha/beta hydrolase
Displaying 19 items

View Taxonomy