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L3_098_000M1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_54_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(635..2980)
DNA (2346bp) protein (782aa)
Ferrous iron transport protein B n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEU3_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:EFQ08303.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ferrous iron transporter FeoB
L3_098_000M1_scaffold_54_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3503..4528)
DNA (1026bp) protein (342aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFQ08304.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EFQ08304.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEU2_9FIRM
L3_098_000M1_scaffold_54_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5021..6094)
DNA (1074bp) protein (358aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Galactose mutarotase and related enzymes (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFX3_9FIRM
L3_098_000M1_scaffold_54_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6703..10647)
DNA (3945bp) protein (1315aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S955_9FIRM
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EDP22153.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Cation/multidrug efflux pump
L3_098_000M1_scaffold_54_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11061..12014
DNA (954bp) protein (318aa)
PSP1 C-terminal domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEX6_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EFQ08278.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Uncharacterized homolog of PSP1
L3_098_000M1_scaffold_54_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12646..13284
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08275.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted O-methyltransferase
L3_098_000M1_scaffold_54_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13288..14145
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEX2_9FIRM
conserved hypothetical protein TIGR00096
L3_098_000M1_scaffold_54_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14186..14677
DNA (492bp) protein (164aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phosphodiesterase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEX1_9FIRM
phosphodiesterase
L3_098_000M1_scaffold_54_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14674..15441
DNA (768bp) protein (256aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EFQ08272.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EFQ08272.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEX0_9FIRM
L3_098_000M1_scaffold_54_10
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15997..17886
DNA (1890bp) protein (630aa)
Putative oligopeptide transporter OPT family n=1 Tax=Blautia sp. CAG:237 RepID=R6KYC2_9FIRM
Putative oligopeptide transporter OPT family {ECO:0000313|EMBL:CDB78480.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
putative oligopeptide transporter, OPT family
L3_098_000M1_scaffold_54_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17886..18239
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07344.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Coenzyme PQQ synthesis protein D (PqqD).
L3_098_000M1_scaffold_54_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18229..18600)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22040.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_098_000M1_scaffold_54_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18842..20125)
DNA (1284bp) protein (428aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFW9_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EFQ07933.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_098_000M1_scaffold_54_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20279..20797
DNA (519bp) protein (173aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFW7_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFQ07931.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L3_098_000M1_scaffold_54_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21217..21816
DNA (600bp) protein (200aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFW5_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ07929.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_098_000M1_scaffold_54_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21868..22833)
DNA (966bp) protein (322aa)
Putative DNA polymerase III, delta' subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFW4_9FIRM
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EFQ07928.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_098_000M1_scaffold_54_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22845..23489)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07927.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Rhomboid family.
L3_098_000M1_scaffold_54_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24369..25946)
DNA (1578bp) protein (526aa)
Magnesium transporter n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGA2_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Mg2+ transporter (mgtE)
L3_098_000M1_scaffold_54_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26626..26985
DNA (360bp) protein (120aa)
Toxin-antitoxin system, toxin component, RelE family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG99_9FIRM
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EFQ07795.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_098_000M1_scaffold_54_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26982..27263
DNA (282bp) protein (94aa)
Transcriptional regulator, XRE family n=3 Tax=Faecalibacterium prausnitzii RepID=D4K8V6_9FIRM
transcriptional regulator, XRE family
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFQ07794.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_098_000M1_scaffold_54_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27759..31304)
DNA (3546bp) protein (1182aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG97_9FIRM
L3_098_000M1_scaffold_54_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31977..32531
DNA (555bp) protein (185aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
Hydrolase, NUDIX family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHC7_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFQ07419.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_098_000M1_scaffold_54_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32528..33217
DNA (690bp) protein (230aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EFQ07418.1}; EC=5.4.99.- {ECO:0000313|EMBL:EFQ07418.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Pseudouridine synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHC6_9FIRM
pseudouridine synthase
L3_098_000M1_scaffold_54_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33419..34096
DNA (678bp) protein (226aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEF4_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ08443.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulators
L3_098_000M1_scaffold_54_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34180..34761)
DNA (582bp) protein (194aa)
Putative manganese efflux pump MntP n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEF3_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted membrane protein
L3_098_000M1_scaffold_54_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35057..36034)
DNA (978bp) protein (326aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08441.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
glycosyl transferase
L3_098_000M1_scaffold_54_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36053..37051)
DNA (999bp) protein (333aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFQ08317.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFQ08317.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
glycosyltransferase, family 2 (EC:2.4.1.212)
Glycosyltransferase, group 2 family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZES9_9FIRM
L3_098_000M1_scaffold_54_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37079..38047)
DNA (969bp) protein (323aa)
Glycosyltransferase, group 2 family (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZET0_9FIRM
Glycosyltransferase, group 2 family {ECO:0000313|EMBL:EFQ08318.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
glycosyl transferase
L3_098_000M1_scaffold_54_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(38191..40773)
DNA (2583bp) protein (861aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEC8_9FIRM
L3_098_000M1_scaffold_54_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40966..42960)
DNA (1995bp) protein (665aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8V0_9FIRM
Displaying items 1-30 of 92 in total

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