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L3_098_000M1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_260_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..168)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05239.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_098_000M1_scaffold_260_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

696..1469
DNA (774bp) protein (258aa)
Conserved hypothetical integral membrane protein TIGR02206 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7L1_9FIRM
conserved hypothetical integral membrane protein TIGR02206
Conserved hypothetical integral membrane protein TIGR02206 {ECO:0000313|EMBL:CBL00824.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_098_000M1_scaffold_260_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1739..1942)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20775.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_098_000M1_scaffold_260_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2847..3134
DNA (288bp) protein (96aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEK1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDP20770.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Helix-turn-helix.
L3_098_000M1_scaffold_260_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3191..4588)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H634_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96620.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted ATPase (AAA+ superfamily)
L3_098_000M1_scaffold_260_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5481..5726
DNA (246bp) protein (82aa)
DNA binding domain, excisionase family n=3 Tax=Faecalibacterium prausnitzii RepID=D4K7K7_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFQ05248.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_098_000M1_scaffold_260_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5817..6662
DNA (846bp) protein (282aa)
DNA binding domain, excisionase family n=3 Tax=Faecalibacterium prausnitzii RepID=A8SEJ6_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFQ05249.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
DNA binding domain, excisionase family
L3_098_000M1_scaffold_260_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6676..7692
DNA (1017bp) protein (339aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H630_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEU96616.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Site-specific recombinase XerD
L3_098_000M1_scaffold_260_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7776..7943)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H629_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96615.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
conserved hypothetical protein (putative transposase or invertase)
L3_098_000M1_scaffold_260_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8672..10045)
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNK9_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Na+-dependent transporters of the SNF family
L3_098_000M1_scaffold_260_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10204..11496)
DNA (1293bp) protein (431aa)
TRAP transporter, DctM subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL1_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EFQ05255.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TRAP transporter subunit DctM
L3_098_000M1_scaffold_260_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11521..11976)
DNA (456bp) protein (152aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL2_9FIRM
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EFQ05256.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_098_000M1_scaffold_260_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12169..13269)
DNA (1101bp) protein (367aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL4_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EFQ05258.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TRAP dicarboxylate family transporter subunit DctP
L3_098_000M1_scaffold_260_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13662..14351
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL5_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ05259.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulators
L3_098_000M1_scaffold_260_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14422..15915)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05260.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_098_000M1_scaffold_260_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16280..18205)
DNA (1926bp) protein (642aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL7_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFQ05261.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L3_098_000M1_scaffold_260_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18254..19159)
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL8_9FIRM
L3_098_000M1_scaffold_260_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19156..19911)
DNA (756bp) protein (252aa)
Transcriptional regulator, DeoR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNL9_9FIRM
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFQ05263.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulators of sugar metabolism
L3_098_000M1_scaffold_260_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20175..21239)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05264.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L3_098_000M1_scaffold_260_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21458..22138
DNA (681bp) protein (227aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM2_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EFQ05266.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_098_000M1_scaffold_260_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22307..23287
DNA (981bp) protein (327aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFQ05267.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFQ05267.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L3_098_000M1_scaffold_260_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23284..23868
DNA (585bp) protein (195aa)
Flavin reductase-like protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM4_9FIRM
Flavin reductase-like protein {ECO:0000313|EMBL:EFQ05268.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_098_000M1_scaffold_260_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24211..25143)
DNA (933bp) protein (311aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM6_9FIRM
L3_098_000M1_scaffold_260_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25303..26577)
DNA (1275bp) protein (425aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM7_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EFQ05271.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_098_000M1_scaffold_260_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26806..27462)
DNA (657bp) protein (219aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM8_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ05272.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type metal ion transport system, permease component
L3_098_000M1_scaffold_260_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27459..28472)
DNA (1014bp) protein (338aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNM9_9FIRM
ABC-type metal ion transport system, ATPase component
L3_098_000M1_scaffold_260_27
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28623..29543)
DNA (921bp) protein (307aa)
ABC-type metal ion transport system periplasmic component/surface antigen n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0V8_9FIRM
ABC-type metal ion transport system periplasmic component/surface antigen {ECO:0000313|EMBL:CDC30348.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L3_098_000M1_scaffold_260_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30081..30872
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05275.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_098_000M1_scaffold_260_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30869..31327
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05276.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_098_000M1_scaffold_260_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31508..32077)
DNA (570bp) protein (190aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN5_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ05279.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
TAT (twin-arginine translocation) pathway signal sequence.
Displaying items 1-30 of 48 in total

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