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L3_098_000M1_scaffold_1213

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_1213_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..298
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S977_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22167.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_098_000M1_scaffold_1213_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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313..1713
DNA (1401bp) protein (467aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEI4_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFQ08418.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phage integrase family.
L3_098_000M1_scaffold_1213_3
unknown

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1805..2050
DNA (246bp) protein (82aa)

This feature has no annotations

L3_098_000M1_scaffold_1213_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2183..2425
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22281.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_098_000M1_scaffold_1213_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2839..3732)
DNA (894bp) protein (298aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB9_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99368.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3734..4360)
DNA (627bp) protein (209aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC0_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CBK99369.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4441..5424)
DNA (984bp) protein (328aa)
Predicted phosphosugar isomerases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC1_9FIRM
Predicted phosphosugar isomerases
Predicted phosphosugar isomerases {ECO:0000313|EMBL:CBK99370.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5512..6348)
DNA (837bp) protein (279aa)
PTS system IID component, Man family (TC 4.A.6) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC2_9FIRM
PTS system IID component, Man family (TC 4.A.6)
PTS system IID component, Man family (TC 4.A.6) {ECO:0000313|EMBL:CBK99371.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6364..7173)
DNA (810bp) protein (270aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC3_9FIRM
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC {ECO:0000313|EMBL:CBK99372.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7205..7672)
DNA (468bp) protein (156aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB {ECO:0000313|EMBL:CBK99373.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBK99373.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC4_9FIRM
L3_098_000M1_scaffold_1213_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7669..8091)
DNA (423bp) protein (141aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:CBK99374.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBK99374.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC5_9FIRM
L3_098_000M1_scaffold_1213_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8357..9085)
DNA (729bp) protein (243aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC6_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK99375.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9525..10340)
DNA (816bp) protein (272aa)
Predicted transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8Y1_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL01294.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_098_000M1_scaffold_1213_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10791..11393
DNA (603bp) protein (201aa)
CHC2 zinc finger domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8W3_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EDP22269.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
DNA primase (bacterial type)
L3_098_000M1_scaffold_1213_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11467..12783
DNA (1317bp) protein (439aa)
Phage/plasmid primase, P4 family, C-terminal domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8Y0_9FIRM
phage/plasmid primase, P4 family, C-terminal domain
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:CBL01293.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_098_000M1_scaffold_1213_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12975..13949
DNA (975bp) protein (325aa)
Plasmid recombination enzyme n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1H4_9FIRM
Plasmid recombination enzyme.
Plasmid recombination enzyme {ECO:0000313|EMBL:CBL00123.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13962..14273
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1H3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00122.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_098_000M1_scaffold_1213_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14289..15581
DNA (1293bp) protein (431aa)
Phage integrase family n=2 Tax=root RepID=D4K8X7_9FIRM
Phage integrase family.
Phage integrase family {ECO:0000313|EMBL:CBL01290.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying 18 items

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