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L3_098_011G1_scaffold_274

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_011G1_scaffold_274_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..471
DNA (471bp) protein (157aa)
H(+)/Cl(-) exchange transporter ClcA n=3 Tax=Escherichia coli RepID=T6CTF6_ECOLX
yadQ; chloride channel protein
H(+)/Cl(-) exchange transporter ClcA {ECO:0000255|HAMAP-Rule:MF_01128}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_098_011G1_scaffold_274_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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553..897
DNA (345bp) protein (115aa)
Iron-sulfur cluster insertion protein ErpA n=2 Tax=Escherichia RepID=F0JQU2_ESCFE
erpA; iron-sulfur cluster insertion protein ErpA
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.5.;"
L3_098_011G1_scaffold_274_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(944..1567)
DNA (624bp) protein (208aa)
UPF0126 inner membrane protein YadS n=1137 Tax=Enterobacteriaceae RepID=YADS_ECOL6
yadS; putative membrane protein YadS
Uncharacterized protein {ECO:0000313|EMBL:KEJ62989.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_098_011G1_scaffold_274_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1605..2405)
DNA (801bp) protein (267aa)
Vitamin B12-binding protein n=683 Tax=Enterobacteriaceae RepID=BTUF_ECOLI
vitamin B12-binding protein
Vitamin B12-binding protein {ECO:0000256|HAMAP-Rule:MF_01000}; Flags: Precursor;; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_098_011G1_scaffold_274_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2398..3096)
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035261}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {ECO:0000256|HAMAP-Rule:MF_01684};; EC=3.2.2.9 {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1205 Tax=Enterobacteriaceae RepID=MTNN_ECO24
mtnN; MTA/SAH nucleosidase MtnN
L3_098_011G1_scaffold_274_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3180..4697
DNA (1518bp) protein (506aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00030}; Short=dGTP triphosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00030};; Short=dGTPase {ECO:0000255|HAMAP-Rule:MF_00030};; EC=3.1.5.1 {ECO:0000255|HAMAP-Rule:MF_00030};; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Deoxyguanosinetriphosphate triphosphohydrolase n=303 Tax=Escherichia RepID=DGTP_ECO45
L3_098_011G1_scaffold_274_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4827..6251
DNA (1425bp) protein (475aa)
degP; Periplasmic serine endoprotease DegP precursor (EC:3.4.21.107)
Protease do n=310 Tax=Escherichia RepID=E2QF90_ECOLX
Protease do {ECO:0000313|EMBL:EGI18181.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_098_011G1_scaffold_274_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6406..7563
DNA (1158bp) protein (386aa)
Carbohydrate diacid regulator n=124 Tax=Escherichia coli RepID=Q8FL12_ECOL6
cdaR; carbohydrate diacid regulator
Carbohydrate diacid regulator {ECO:0000313|EMBL:ESD23344.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_098_011G1_scaffold_274_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7616..8002)
DNA (387bp) protein (129aa)
UPF0325 protein YaeH n=1417 Tax=Enterobacteriaceae RepID=YAEH_ECO24
hypothetical protein
UPF0325 protein YaeH {ECO:0000256|HAMAP-Rule:MF_01519}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L3_098_011G1_scaffold_274_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8320..9144)
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=424 Tax=Escherichia RepID=DAPD_ECO27
L3_098_011G1_scaffold_274_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9175..11847)
DNA (2673bp) protein (891aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=9 Tax=Escherichia coli RepID=E6AI47_ECOLX
uridylyltransferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_098_011G1_scaffold_274_12
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11909..12703)
DNA (795bp) protein (265aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=344609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii serotype 18 (strain CDC 3083-94 / BS512).;"
Methionine aminopeptidase n=1336 Tax=Enterobacteriaceae RepID=MAP1_ECO57
L3_098_011G1_scaffold_274_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13071..13796
DNA (726bp) protein (242aa)
30S ribosomal protein S2 n=1 Tax=Escherichia coli LAU-EC10 RepID=V8K7R8_ECOLX
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L3_098_011G1_scaffold_274_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13931..14782
DNA (852bp) protein (284aa)
Elongation factor Ts n=1359 Tax=Enterobacteriaceae RepID=EFTS_ECO24
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_098_011G1_scaffold_274_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14929..15219
DNA (291bp) protein (97aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
Uridylate kinase n=1 Tax=Salmonella enterica subsp. enterica serovar Paratyphi A str. ZJ98-53 RepID=S3FR74_SALPT
Displaying 15 items

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