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L3_098_011G1_scaffold_419

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_011G1_scaffold_419_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..330
DNA (330bp) protein (110aa)
Putative resolvase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQN9_CLOP1
resolvase
Putative resolvase {ECO:0000313|EMBL:EIA17044.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_098_011G1_scaffold_419_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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543..2159
DNA (1617bp) protein (539aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9J639_BACVU
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS55619.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
AraC family transcriptional regulator
L3_098_011G1_scaffold_419_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2264..3115)
DNA (852bp) protein (284aa)
Nicotinate-nucleotide pyrophosphorylase n=3 Tax=Bacteroides RepID=A6L2X0_BACV8
nicotinate-nucleotide pyrophosphorylase
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:ABR40034.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_098_011G1_scaffold_419_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3196..3669
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Ribosomal RNA large subunit methyltransferase H n=5 Tax=root RepID=D4VD13_BACVU
rRNA large subunit methyltransferase
L3_098_011G1_scaffold_419_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3746..4756)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2W8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40032.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_098_011G1_scaffold_419_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4762..6219)
DNA (1458bp) protein (486aa)
Xaa-His dipeptidase family protein {ECO:0000313|EMBL:KDS32017.1}; EC=3.4.13.20 {ECO:0000313|EMBL:KDS32017.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Aminoacyl-histidine dipeptidase n=3 Tax=Bacteroides vulgatus RepID=A6L2W7_BACV8
aminoacyl-histidine dipeptidase
L3_098_011G1_scaffold_419_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6441..6668
DNA (228bp) protein (76aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L2W6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05958.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_011G1_scaffold_419_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6691..7305
DNA (615bp) protein (205aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L2W5_BACV8
hypothetical protein
Outer membrane family protein {ECO:0000313|EMBL:KDS55625.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_011G1_scaffold_419_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7424..7720
DNA (297bp) protein (99aa)
Thioredoxin n=2 Tax=Bacteroides vulgatus RepID=A6L2W4_BACV8
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ABR40028.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_098_011G1_scaffold_419_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7724..8182
DNA (459bp) protein (153aa)
Thioredoxin n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HXQ7_BACVU
Thioredoxin {ECO:0000313|EMBL:EOS05955.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
thioredoxin
L3_098_011G1_scaffold_419_11
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8286..8837)
DNA (552bp) protein (184aa)
Rubredoxin n=15 Tax=Bacteroides RepID=C3Q1E1_9BACE
rubrerythrin
Rubredoxin {ECO:0000313|EMBL:EEO61390.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_098_011G1_scaffold_419_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8915..9325)
DNA (411bp) protein (137aa)
Transcriptional regulator, involved in iron uptake n=7 Tax=Bacteroides RepID=A6L2W1_BACV8
transcriptional regulator, involved in iron uptake
Uncharacterized protein {ECO:0000313|EMBL:EIY81924.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_011G1_scaffold_419_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9451..11415
DNA (1965bp) protein (655aa)
NAD+ synthetase {ECO:0000313|EMBL:EFG16307.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EFG16307.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
nadE; NAD synthetase (EC:6.3.1.5)
NAD+ synthase n=2 Tax=Bacteroides RepID=C6Z466_9BACE
Displaying 13 items

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