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L3_098_023G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_023G1_scaffold_82_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(125..1972)
DNA (1848bp) protein (616aa)
GTP-binding protein TypA {ECO:0000313|EMBL:EFE59249.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EFE59249.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
GTP-binding protein TypA n=53 Tax=Staphylococcus epidermidis RepID=Q5HQ60_STAEQ
GTP-binding protein TypA/BipA
L3_098_023G1_scaffold_82_2

Not on your lists

2071..2262
DNA (192bp) protein (64aa)
Uncharacterized protein n=53 Tax=Staphylococcus epidermidis RepID=Q8CT07_STAES
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ17957.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_098_023G1_scaffold_82_3

Not on your lists

comp(2816..3637)
DNA (822bp) protein (274aa)
Inositol monophosphatase family protein n=30 Tax=Staphylococcus epidermidis RepID=C5Q8B7_STAEP
Inositol monophosphatase family protein {ECO:0000313|EMBL:ETJ17956.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
inositol monophosphatase
L3_098_023G1_scaffold_82_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3814..4425
DNA (612bp) protein (204aa)
UPF0637 protein SERP0693 n=53 Tax=Staphylococcus epidermidis RepID=Y693_STAEQ
hypothetical protein
UPF0637 protein SE_0804 {ECO:0000255|HAMAP-Rule:MF_01851}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_098_023G1_scaffold_82_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4540..5901
DNA (1362bp) protein (454aa)
Divalent metal cation transporter MntH n=5 Tax=Staphylococcus epidermidis RepID=MNTH_STAES
manganese transport protein MntH
Divalent metal cation transporter MntH {ECO:0000255|HAMAP-Rule:MF_00221}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_098_023G1_scaffold_82_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6114..6650)
DNA (537bp) protein (179aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=D4FJX7_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59254.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
L3_098_023G1_scaffold_82_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6955..8106)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=D4FJX8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59255.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
L3_098_023G1_scaffold_82_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8175..9248)
DNA (1074bp) protein (358aa)
ABC transporter, solute-binding protein n=5 Tax=Staphylococcus epidermidis RepID=H3VDA1_STAEP
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFE59256.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
L3_098_023G1_scaffold_82_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9245..9988)
DNA (744bp) protein (248aa)
Spermidine/putrescine ABC transporter, permease protein PotC n=38 Tax=Staphylococcus epidermidis RepID=Q5HQ68_STAEQ
potC; spermidine/putrescine ABC transporter permease PotC
Spermidine/putrescine ABC transporter, permease protein PotC {ECO:0000313|EMBL:AAW54067.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_023G1_scaffold_82_10

Not on your lists

comp(10063..10866)
DNA (804bp) protein (268aa)
PotB protein n=33 Tax=Staphylococcus epidermidis RepID=Q8CPM9_STAES
potB protein
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ17949.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_098_023G1_scaffold_82_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10859..11953)
DNA (1095bp) protein (365aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000255|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000255|HAMAP-Rule:MF_01726};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Spermidine/putrescine import ATP-binding protein PotA n=26 Tax=Staphylococcus epidermidis RepID=POTA_STAEQ
potA; spermidine/putrescine ABC transporter ATP-binding protein
L3_098_023G1_scaffold_82_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11965..12504)
DNA (540bp) protein (180aa)
Transcriptional regulator, Cro/CI family n=51 Tax=Staphylococcus epidermidis RepID=Q5HQ71_STAEQ
hypothetical protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFE59260.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_023G1_scaffold_82_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12643..12921)
DNA (279bp) protein (93aa)
UPF0223 protein SERP0684 n=46 Tax=Staphylococcus epidermidis RepID=Y684_STAEQ
hypothetical protein
UPF0223 protein SE_0795 {ECO:0000255|HAMAP-Rule:MF_01041}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_098_023G1_scaffold_82_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13223..14629)
DNA (1407bp) protein (469aa)
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Dihydrolipoyl dehydrogenase n=65 Tax=Staphylococcus epidermidis RepID=Q5HQ73_STAEQ
L3_098_023G1_scaffold_82_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14634..15935)
DNA (1302bp) protein (434aa)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC:2.3.1.12)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; EC=2.3.1.12;; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; E2; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=45 Tax=Staphylococcus epidermidis RepID=ODP2_STAEQ
L3_098_023G1_scaffold_82_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16066..17043)
DNA (978bp) protein (326aa)
Pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta; EC=1.2.4.1;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Pyruvate dehydrogenase E1 component subunit beta n=65 Tax=Staphylococcus epidermidis RepID=ODPB_STAEQ
L3_098_023G1_scaffold_82_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17047..18159)
DNA (1113bp) protein (371aa)
Pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha; EC=1.2.4.1;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Pyruvate dehydrogenase E1 component subunit alpha n=63 Tax=Staphylococcus epidermidis RepID=ODPA_STAEQ
L3_098_023G1_scaffold_82_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18330..18956)
DNA (627bp) protein (209aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=C5Q8A2_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59266.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_023G1_scaffold_82_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19139..19690
DNA (552bp) protein (184aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; Short=PDF {ECO:0000255|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000255|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Peptide deformylase n=50 Tax=Staphylococcus epidermidis RepID=DEF_STAEQ
L3_098_023G1_scaffold_82_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20122..20340
DNA (219bp) protein (73aa)
UPF0356 protein SERP0677 n=79 Tax=Staphylococcus epidermidis RepID=Y677_STAEQ
Protein of unknown function DUF1447
UPF0356 protein M464_0209775 {ECO:0000256|HAMAP-Rule:MF_01553}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_098_023G1_scaffold_82_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20340..22022
DNA (1683bp) protein (561aa)
Ribonuclease J 1 {ECO:0000255|HAMAP-Rule:MF_01491}; Short=RNase J1 {ECO:0000255|HAMAP-Rule:MF_01491};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01491};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Ribonuclease J 1 n=78 Tax=Staphylococcus RepID=RNJ1_STAEQ
Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog
L3_098_023G1_scaffold_82_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23004..23663)
DNA (660bp) protein (220aa)
Potassium uptake protein TrkA n=80 Tax=Staphylococcus RepID=Q5HQ81_STAEQ
trkA-N domain protein
TrkA potassium uptake family protein {ECO:0000313|EMBL:ETJ13643.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_098_023G1_scaffold_82_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23719..24735)
DNA (1017bp) protein (339aa)
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EFE59271.1}; EC=1.10.3.- {ECO:0000313|EMBL:EFE59271.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Cytochrome d ubiquinol oxidase, subunit II n=37 Tax=Staphylococcus epidermidis RepID=C5Q897_STAEP
cytochrome d ubiquinol oxidase subunit II-like protein
L3_098_023G1_scaffold_82_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24732..26087)
DNA (1356bp) protein (452aa)
cydA; cytochrome d ubiquinol oxidase, subunit I (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase, subunit I {ECO:0000313|EMBL:AAW54037.1}; EC=1.10.3.- {ECO:0000313|EMBL:AAW54037.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Cytochrome d ubiquinol oxidase, subunit I n=45 Tax=Staphylococcus RepID=Q5HQ83_STAEQ
L3_098_023G1_scaffold_82_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26288..26524
DNA (237bp) protein (79aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HQ84_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54036.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_023G1_scaffold_82_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26799..28517)
DNA (1719bp) protein (573aa)
ptsI; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Phosphoenolpyruvate-protein phosphotransferase n=45 Tax=Staphylococcus RepID=PT1_STAEQ
L3_098_023G1_scaffold_82_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28520..28786)
DNA (267bp) protein (89aa)
Phosphocarrier protein HPr {ECO:0000313|EMBL:EFE59275.1}; EC=2.7.11.- {ECO:0000313|EMBL:EFE59275.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Phosphocarrier protein HPr n=81 Tax=Staphylococcus epidermidis RepID=Q5HQ86_STAEQ
ptsH; phosphocarrier protein HPr
L3_098_023G1_scaffold_82_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28942..29481)
DNA (540bp) protein (180aa)
Uncharacterized protein n=61 Tax=Staphylococcus epidermidis RepID=Q5HQ87_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54025.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_023G1_scaffold_82_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29541..30713)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HQ88_STAEQ
met-10+ like-family protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59277.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_023G1_scaffold_82_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31019..32311)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HQ89_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59278.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 101 in total

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