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L3_098_030G1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_30_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(114..1961)
DNA (1848bp) protein (616aa)
GTP-binding protein TypA {ECO:0000313|EMBL:EFE59249.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EFE59249.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
GTP-binding protein TypA n=53 Tax=Staphylococcus epidermidis RepID=Q5HQ60_STAEQ
GTP-binding protein TypA/BipA
L3_098_030G1_scaffold_30_2

Not on your lists

2060..2251
DNA (192bp) protein (64aa)
Uncharacterized protein n=53 Tax=Staphylococcus epidermidis RepID=Q8CT07_STAES
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ17957.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_098_030G1_scaffold_30_3

Not on your lists

comp(2805..3626)
DNA (822bp) protein (274aa)
Inositol monophosphatase family protein n=30 Tax=Staphylococcus epidermidis RepID=C5Q8B7_STAEP
Inositol monophosphatase family protein {ECO:0000313|EMBL:ETJ17956.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
inositol monophosphatase
L3_098_030G1_scaffold_30_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3803..4414
DNA (612bp) protein (204aa)
UPF0637 protein SERP0693 n=53 Tax=Staphylococcus epidermidis RepID=Y693_STAEQ
hypothetical protein
UPF0637 protein SE_0804 {ECO:0000255|HAMAP-Rule:MF_01851}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_098_030G1_scaffold_30_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4529..5890
DNA (1362bp) protein (454aa)
Divalent metal cation transporter MntH n=5 Tax=Staphylococcus epidermidis RepID=MNTH_STAES
manganese transport protein MntH
Divalent metal cation transporter MntH {ECO:0000255|HAMAP-Rule:MF_00221}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_098_030G1_scaffold_30_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6103..6639)
DNA (537bp) protein (179aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=D4FJX7_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59254.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
L3_098_030G1_scaffold_30_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6944..8095)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=D4FJX8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59255.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
L3_098_030G1_scaffold_30_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8164..9237)
DNA (1074bp) protein (358aa)
ABC transporter, solute-binding protein n=5 Tax=Staphylococcus epidermidis RepID=H3VDA1_STAEP
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFE59256.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
L3_098_030G1_scaffold_30_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9234..9977)
DNA (744bp) protein (248aa)
Spermidine/putrescine ABC transporter, permease protein PotC n=38 Tax=Staphylococcus epidermidis RepID=Q5HQ68_STAEQ
potC; spermidine/putrescine ABC transporter permease PotC
Spermidine/putrescine ABC transporter, permease protein PotC {ECO:0000313|EMBL:AAW54067.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_30_10

Not on your lists

comp(10052..10855)
DNA (804bp) protein (268aa)
PotB protein n=33 Tax=Staphylococcus epidermidis RepID=Q8CPM9_STAES
potB protein
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ17949.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_098_030G1_scaffold_30_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10848..11942)
DNA (1095bp) protein (365aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000255|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000255|HAMAP-Rule:MF_01726};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Spermidine/putrescine import ATP-binding protein PotA n=26 Tax=Staphylococcus epidermidis RepID=POTA_STAEQ
potA; spermidine/putrescine ABC transporter ATP-binding protein
L3_098_030G1_scaffold_30_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11954..12493)
DNA (540bp) protein (180aa)
Transcriptional regulator, Cro/CI family n=51 Tax=Staphylococcus epidermidis RepID=Q5HQ71_STAEQ
hypothetical protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFE59260.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_30_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12632..12910)
DNA (279bp) protein (93aa)
UPF0223 protein SERP0684 n=46 Tax=Staphylococcus epidermidis RepID=Y684_STAEQ
hypothetical protein
UPF0223 protein SE_0795 {ECO:0000255|HAMAP-Rule:MF_01041}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_098_030G1_scaffold_30_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13212..14618)
DNA (1407bp) protein (469aa)
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Dihydrolipoyl dehydrogenase n=65 Tax=Staphylococcus epidermidis RepID=Q5HQ73_STAEQ
L3_098_030G1_scaffold_30_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14623..15924)
DNA (1302bp) protein (434aa)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC:2.3.1.12)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; EC=2.3.1.12;; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; E2; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=45 Tax=Staphylococcus epidermidis RepID=ODP2_STAEQ
L3_098_030G1_scaffold_30_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16055..17032)
DNA (978bp) protein (326aa)
Pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta; EC=1.2.4.1;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Pyruvate dehydrogenase E1 component subunit beta n=65 Tax=Staphylococcus epidermidis RepID=ODPB_STAEQ
L3_098_030G1_scaffold_30_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17036..18148)
DNA (1113bp) protein (371aa)
Pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha; EC=1.2.4.1;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Pyruvate dehydrogenase E1 component subunit alpha n=63 Tax=Staphylococcus epidermidis RepID=ODPA_STAEQ
L3_098_030G1_scaffold_30_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18319..18945)
DNA (627bp) protein (209aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=C5Q8A2_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59266.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_30_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19128..19679
DNA (552bp) protein (184aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; Short=PDF {ECO:0000255|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000255|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Peptide deformylase n=50 Tax=Staphylococcus epidermidis RepID=DEF_STAEQ
L3_098_030G1_scaffold_30_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20111..20329
DNA (219bp) protein (73aa)
UPF0356 protein SERP0677 n=79 Tax=Staphylococcus epidermidis RepID=Y677_STAEQ
Protein of unknown function DUF1447
UPF0356 protein M464_0209775 {ECO:0000256|HAMAP-Rule:MF_01553}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_098_030G1_scaffold_30_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20329..22011
DNA (1683bp) protein (561aa)
Ribonuclease J 1 {ECO:0000255|HAMAP-Rule:MF_01491}; Short=RNase J1 {ECO:0000255|HAMAP-Rule:MF_01491};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01491};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Ribonuclease J 1 n=78 Tax=Staphylococcus RepID=RNJ1_STAEQ
Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog
L3_098_030G1_scaffold_30_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22993..23652)
DNA (660bp) protein (220aa)
Potassium uptake protein TrkA n=80 Tax=Staphylococcus RepID=Q5HQ81_STAEQ
trkA-N domain protein
TrkA potassium uptake family protein {ECO:0000313|EMBL:ETJ13643.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_098_030G1_scaffold_30_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23708..24724)
DNA (1017bp) protein (339aa)
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EFE59271.1}; EC=1.10.3.- {ECO:0000313|EMBL:EFE59271.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Cytochrome d ubiquinol oxidase, subunit II n=37 Tax=Staphylococcus epidermidis RepID=C5Q897_STAEP
cytochrome d ubiquinol oxidase subunit II-like protein
L3_098_030G1_scaffold_30_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24721..26076)
DNA (1356bp) protein (452aa)
cydA; cytochrome d ubiquinol oxidase, subunit I (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase, subunit I {ECO:0000313|EMBL:AAW54037.1}; EC=1.10.3.- {ECO:0000313|EMBL:AAW54037.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Cytochrome d ubiquinol oxidase, subunit I n=45 Tax=Staphylococcus RepID=Q5HQ83_STAEQ
L3_098_030G1_scaffold_30_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26277..26513
DNA (237bp) protein (79aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HQ84_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54036.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_30_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26788..28506)
DNA (1719bp) protein (573aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
ptsI; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=45 Tax=Staphylococcus RepID=PT1_STAEQ
L3_098_030G1_scaffold_30_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28509..28775)
DNA (267bp) protein (89aa)
Phosphocarrier protein HPr {ECO:0000313|EMBL:EFE59275.1}; EC=2.7.11.- {ECO:0000313|EMBL:EFE59275.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Phosphocarrier protein HPr n=81 Tax=Staphylococcus epidermidis RepID=Q5HQ86_STAEQ
ptsH; phosphocarrier protein HPr
L3_098_030G1_scaffold_30_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28931..29470)
DNA (540bp) protein (180aa)
Uncharacterized protein n=61 Tax=Staphylococcus epidermidis RepID=Q5HQ87_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54025.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_30_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29530..30702)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HQ88_STAEQ
met-10+ like-family protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59277.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_30_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31008..32300)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HQ89_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59278.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 75 in total

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