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L3_098_030G1_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_60_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..524)
DNA (522bp) protein (174aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Dihydrolipoyl dehydrogenase n=3 Tax=Parabacteroides RepID=A6L9U7_PARD8
dihydrolipoamide dehydrogenase
L3_098_030G1_scaffold_60_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(539..1153)
DNA (615bp) protein (205aa)
Nitroreductase n=2 Tax=Bacteroidales RepID=A6L9U8_PARD8
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ABR42462.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_030G1_scaffold_60_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


1376..1615
DNA (240bp) protein (80aa)
50S ribosomal protein L28 n=10 Tax=Bacteroidales RepID=RL28_PARD8
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_030G1_scaffold_60_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


1635..1823
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=9 Tax=Bacteroidales RepID=RL33_PARD8
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_098_030G1_scaffold_60_5
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1840..1992
DNA (153bp) protein (51aa)
Uncharacterized protein n=18 Tax=Bacteroidales RepID=A7AEM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEY85189.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_098_030G1_scaffold_60_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2212..3336
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
DNA polymerase III subunit beta n=8 Tax=Bacteroidales RepID=A6L9V1_PARD8
DNA polymerase III subunit beta
L3_098_030G1_scaffold_60_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3347..4117
DNA (771bp) protein (257aa)
DNA polymerase III epsilon chain n=9 Tax=Bacteroidales RepID=A6L9V2_PARD8
DNA polymerase III subunit epsilon
DNA polymerase III epsilon chain {ECO:0000313|EMBL:ABR42466.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_030G1_scaffold_60_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4122..5273
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BA06_9PORP
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:KDS45925.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
alcohol dehydrogenase
L3_098_030G1_scaffold_60_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5323..6528
DNA (1206bp) protein (402aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFK62856.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFK62856.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFK62856.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Parabacteroides RepID=E1YU02_9PORP
flavoprotein
L3_098_030G1_scaffold_60_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6525..7436
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9I2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY85184.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_098_030G1_scaffold_60_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7444..9108
DNA (1665bp) protein (555aa)
DNA repair protein RecN n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGM9_9PORP
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
DNA repair protein recN
L3_098_030G1_scaffold_60_12
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9184..9816
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=D0T9I0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY85182.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_098_030G1_scaffold_60_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9813..10628)
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BA01_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87141.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
two-component system response regulator
L3_098_030G1_scaffold_60_14
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10585..11625)
DNA (1041bp) protein (347aa)
Histidine kinase n=3 Tax=Bacteroidales RepID=D0T9H8_9BACE
Histidine kinase {ECO:0000313|EMBL:EEY85180.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
two-component system sensor histidine kinase
L3_098_030G1_scaffold_60_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11629..12939)
DNA (1311bp) protein (437aa)
Outer membrane efflux protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9H7_9BACE
Outer membrane efflux family protein {ECO:0000313|EMBL:KDS45870.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
outer membrane protein
L3_098_030G1_scaffold_60_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12949..15990)
DNA (3042bp) protein (1014aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9H6_9BACE
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EEY85178.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
AcrB/AcrD/AcrF family transporter
L3_098_030G1_scaffold_60_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15996..17036)
DNA (1041bp) protein (347aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9H5_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEY85177.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
multidrug efflux system protein
L3_098_030G1_scaffold_60_18
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17320..17910
DNA (591bp) protein (197aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Thymidine kinase n=5 Tax=Bacteroidales RepID=A6L9W3_PARD8
thymidine kinase
L3_098_030G1_scaffold_60_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17960..18706
DNA (747bp) protein (249aa)
tRNA/rRNA methyltransferase n=3 Tax=Parabacteroides RepID=A6L9W4_PARD8
tRNA/rRNA methyltransferase
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:ABR42478.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_030G1_scaffold_60_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18734..19114
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=8 Tax=Bacteroidales RepID=D7IQ14_9BACE
translation initiation inhibitor endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EFK62845.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_098_030G1_scaffold_60_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19238..21088)
DNA (1851bp) protein (617aa)
UPF0313 protein HMPREF9008_00991 n=2 Tax=Parabacteroides RepID=E1YTZ0_9PORP
UPF0313 protein HMPREF9008_00991 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_098_030G1_scaffold_60_22
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21243..22244
DNA (1002bp) protein (334aa)
Lactate/malate dehydrogenase, NAD binding domain protein n=3 Tax=Bacteroidales RepID=D0T9H0_9BACE
Lactate/malate dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:EFK62843.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
malate dehydrogenase
L3_098_030G1_scaffold_60_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22329..22718)
DNA (390bp) protein (130aa)
Antibiotic biosynthesis monooxygenase n=2 Tax=Parabacteroides RepID=E1YTY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32690.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
carboxymuconolactone decarboxylase
L3_098_030G1_scaffold_60_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22917..25409)
DNA (2493bp) protein (831aa)
Alanyl dipeptidyl peptidase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87130.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
alanyl dipeptidyl peptidase
L3_098_030G1_scaffold_60_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25421..26002)
DNA (582bp) protein (194aa)
Methyltransferase domain protein n=6 Tax=Bacteroidales RepID=C7X751_9PORP
Methyltransferase domain protein {ECO:0000313|EMBL:KDS51249.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
methyltransferase
L3_098_030G1_scaffold_60_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25999..26814)
DNA (816bp) protein (272aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9G5_9BACE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_098_030G1_scaffold_60_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27202..28455)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6B986_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS51241.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_098_030G1_scaffold_60_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29088..29474)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AGX8_9PORP
Helix-turn-helix family protein {ECO:0000313|EMBL:KDS68477.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
transcriptional regulator
L3_098_030G1_scaffold_60_29
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29777..30181
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A4B9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49807.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_098_030G1_scaffold_60_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30330..31745)
DNA (1416bp) protein (472aa)
Transporter, major facilitator family protein n=2 Tax=Parabacteroides RepID=E1YTY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32683.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
oxalate:formate antiporter
Displaying items 1-30 of 51 in total

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