ggKbase home page

L3_098_030G1_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_101_1
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(798..2252)
DNA (1455bp) protein (485aa)
Aminoacyl-histidine dipeptidase n=2 Tax=Parabacteroides RepID=A6LF37_PARD8
aminoacyl-histidine dipeptidase
Dipeptidase D {ECO:0000313|EMBL:KEJ84655.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_098_030G1_scaffold_101_2
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2303..3316)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AEZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84654.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_098_030G1_scaffold_101_3
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


3412..4212
DNA (801bp) protein (267aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Ribosomal RNA small subunit methyltransferase A n=6 Tax=Bacteroidales RepID=C7XDK7_9PORP
ksgA; dimethyladenosine transferase
L3_098_030G1_scaffold_101_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4228..5574
DNA (1347bp) protein (449aa)
Magnesium transporter n=9 Tax=Bacteroidales RepID=A6LF40_PARD8
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_098_030G1_scaffold_101_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5686..6024
DNA (339bp) protein (113aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LF41_PARD8
hypothetical protein
LrgA family protein {ECO:0000313|EMBL:EEU49962.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_098_030G1_scaffold_101_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6028..6732
DNA (705bp) protein (235aa)
Membrane protein n=9 Tax=Bacteroidales RepID=D7IUZ0_9BACE
hypothetical protein
TIGR00659 family protein {ECO:0000313|EMBL:EKN23917.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_098_030G1_scaffold_101_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6833..7399
DNA (567bp) protein (189aa)
Elongation factor P n=9 Tax=Bacteroidales RepID=EFP_PARD8
elongation factor P
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_030G1_scaffold_101_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7485..8192
DNA (708bp) protein (236aa)
DNA repair protein RadC n=2 Tax=Parabacteroides RepID=E1YXJ3_9PORP
DNA repair protein RadC {ECO:0000313|EMBL:EFK61685.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
DNA repair protein
L3_098_030G1_scaffold_101_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8264..8581
DNA (318bp) protein (106aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LF45_PARD8
hypothetical protein
FeS assembly SUF system protein {ECO:0000313|EMBL:EKN18606.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_098_030G1_scaffold_101_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8578..9357
DNA (780bp) protein (260aa)
UDP-2,3-diacylglucosamine hydrolase n=9 Tax=Bacteroidales RepID=A6LF46_PARD8
UDP-2,3-diacylglucosamine hydrolase
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEY82905.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_098_030G1_scaffold_101_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9405..10223)
DNA (819bp) protein (273aa)
Phosphate ABC transporter, phosphate-binding protein n=9 Tax=Bacteroidales RepID=A6LF47_PARD8
phosphate ABC transporter substrate-binding protein
Phosphate binding protein {ECO:0000313|EMBL:EFK61688.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_098_030G1_scaffold_101_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10309..11568)
DNA (1260bp) protein (420aa)
Phosphate-selective porin O and P n=5 Tax=Bacteroidales RepID=C7XDL6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS64373.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_098_030G1_scaffold_101_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11851..12921
DNA (1071bp) protein (357aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LF49_PARD8
hypothetical protein
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EEU49970.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_098_030G1_scaffold_101_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12982..14430)
DNA (1449bp) protein (483aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides RepID=E1YXJ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23909.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_098_030G1_scaffold_101_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14449..15015)
DNA (567bp) protein (189aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=C7XDL9_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU49972.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_098_030G1_scaffold_101_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15187..15798)
DNA (612bp) protein (204aa)
Transcriptional regulator, LuxR family n=2 Tax=Parabacteroides RepID=E1YXK1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23907.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
transcriptional regulator
L3_098_030G1_scaffold_101_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15809..16558)
DNA (750bp) protein (250aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=A6LF53_PARD8
hypothetical protein
Transcriptional regulator, LuxR family domain protein {ECO:0000313|EMBL:EFI07659.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_098_030G1_scaffold_101_18
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16581..17732)
DNA (1152bp) protein (384aa)
Endoribonuclease L-PSP n=2 Tax=Parabacteroides RepID=E1YXK3_9PORP
Endoribonuclease L-PSP {ECO:0000313|EMBL:EFK61695.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
translation initiation inhibitor
L3_098_030G1_scaffold_101_19
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17747..18454)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IKE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50813.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_098_030G1_scaffold_101_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18464..19699)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LF56_PARD8
hypothetical protein
Phosphate-selective porin O and P family protein {ECO:0000313|EMBL:KDS64362.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_098_030G1_scaffold_101_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19722..21128)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0TFP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82916.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_098_030G1_scaffold_101_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21146..22357)
DNA (1212bp) protein (404aa)
Imelysin superfamily protein n=4 Tax=Bacteroidales RepID=D7IUS6_9BACE
iron-regulated protein A
Imelysin {ECO:0000313|EMBL:EEU49979.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_098_030G1_scaffold_101_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22388..23701)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LF59_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44323.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_098_030G1_scaffold_101_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24031..24291
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A7E0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23899.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_098_030G1_scaffold_101_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24303..24644
DNA (342bp) protein (114aa)
Toxin-antitoxin system, antitoxin component, HicB family n=3 Tax=Bacteroidales RepID=D0TFP6_9BACE
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EFK61702.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
HicB family protein
L3_098_030G1_scaffold_101_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24976..25881)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFP7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82921.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_098_030G1_scaffold_101_27

Not on your lists

comp(26903..27139)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Bacteroides sp. 2_1_7 RepID=UPI0001B4982A
Uncharacterized protein {ECO:0000313|EMBL:EKC72477.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ATPase AAA
L3_098_030G1_scaffold_101_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27677..29224
DNA (1548bp) protein (516aa)
Arylsulfatase {ECO:0000313|EMBL:EEY82925.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEY82925.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Arylsulfatase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFQ1_9BACE
arylsulfatase
L3_098_030G1_scaffold_101_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29224..30786
DNA (1563bp) protein (521aa)
Arylsulfatase {ECO:0000313|EMBL:EEU49986.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEU49986.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Arylsulfatase n=1 Tax=Parabacteroides sp. D13 RepID=C7XDN3_9PORP
arylsulfatase
L3_098_030G1_scaffold_101_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30890..31549
DNA (660bp) protein (220aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LF66_PARD8
hypothetical protein
LysE type translocator family protein {ECO:0000313|EMBL:KDS73755.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 44 in total

View Taxonomy