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L3_098_030G1_scaffold_205

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_205_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(482..1567)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX66_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13713.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_098_030G1_scaffold_205_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1640..3139)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX66_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13713.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_098_030G1_scaffold_205_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3235..5010)
DNA (1776bp) protein (592aa)
Probable aminopeptidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XM18_CLOPE
metallopeptidase, M24 family
Probable aminopeptidase {ECO:0000313|EMBL:BAB80578.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_205_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5373..5936
DNA (564bp) protein (188aa)
Putative AgrB-like protein {ECO:0000256|HAMAP-Rule:MF_00784}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00784};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative AgrB-like protein 1 n=7 Tax=Clostridium perfringens RepID=AGRB1_CLOPE
AgrB family protein
L3_098_030G1_scaffold_205_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5938..6060
DNA (123bp) protein (41aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CTW9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13716.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_098_030G1_scaffold_205_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6063..7325
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Putative sensor histidine kinase n=1 Tax=Clostridium perfringens F262 RepID=H7CTW8_CLOPF
sensor histidine kinase
L3_098_030G1_scaffold_205_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7377..7946)
DNA (570bp) protein (190aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMX5_CLOPF
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT72238.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
GNAT family acetyltransferase
L3_098_030G1_scaffold_205_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8486..9646
DNA (1161bp) protein (387aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Alanine racemase n=4 Tax=Clostridium perfringens RepID=H7CTW5_CLOPF
L3_098_030G1_scaffold_205_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9757..9936)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CTW4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18116.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_098_030G1_scaffold_205_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10281..10454)
DNA (174bp) protein (58aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CTW2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT28372.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_098_030G1_scaffold_205_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10561..11985)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XM26_CLOPE
MATE efflux family protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80570.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_205_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12126..12584)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CP27_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13726.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_098_030G1_scaffold_205_13
unknown

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comp(12597..12734)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_098_030G1_scaffold_205_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12839..14275)
DNA (1437bp) protein (479aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
ATP-dependent RNA helicase DbpA n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUN5_CLOPS
deaD; ATP-dependent RNA helicase DeaD
L3_098_030G1_scaffold_205_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14663..15784)
DNA (1122bp) protein (374aa)
glxK; glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:EDT28337.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EDT28337.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Glycerate kinase n=2 Tax=Clostridium perfringens RepID=Q0TST6_CLOP1
L3_098_030G1_scaffold_205_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16008..17267)
DNA (1260bp) protein (420aa)
Probable gluconate permease n=8 Tax=Clostridium perfringens RepID=Q8XM30_CLOPE
gluconate permease
Putative permease protein {ECO:0000313|EMBL:EDT24871.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_098_030G1_scaffold_205_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17415..18476)
DNA (1062bp) protein (354aa)
Putative carbohydrate diacid regulator n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1Y5_CLOPF
Putative carbohydrate diacid regulator {ECO:0000313|EMBL:EDT72203.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
carbohydrate diacid regulator
L3_098_030G1_scaffold_205_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18791..19963)
DNA (1173bp) protein (391aa)
NADH-dependent butanol dehydrogenase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XM32_CLOPE
bdhA; NADH-dependent butanol dehydrogenase
NADH-dependent butanol dehydrogenase {ECO:0000313|EMBL:BAB80564.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_205_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20203..20760
DNA (558bp) protein (186aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1Y7_CLOPF
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT72180.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
acetyltransferase
L3_098_030G1_scaffold_205_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21016..24084)
DNA (3069bp) protein (1023aa)
Glycosyl hydrolase, family 38 n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RD71_CLOPF
Glycosyl hydrolase, family 38 {ECO:0000313|EMBL:EDT28172.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
alpha-mannosidase
L3_098_030G1_scaffold_205_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24610..25149)
DNA (540bp) protein (180aa)
Rubrerythrin n=3 Tax=Clostridium perfringens RepID=Q0SUP2_CLOPS
rubY; rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:EDT13753.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_098_030G1_scaffold_205_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25354..26271)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RD73_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28315.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_098_030G1_scaffold_205_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26435..27577)
DNA (1143bp) protein (381aa)
Aminotransferase, class V n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RD74_CLOPF
Aminotransferase, class V {ECO:0000313|EMBL:EDT28255.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
class V aminotransferase
L3_098_030G1_scaffold_205_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27783..31721)
DNA (3939bp) protein (1313aa)
Beta-N-acetylhexosaminidase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RD75_CLOPF
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:EDT28227.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
glycosyl hydrolase
L3_098_030G1_scaffold_205_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31846..31920
DNA (75bp) protein (25aa)
ISCpe7, transposase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUD6_CLOPS
ISCpe7, transposase
ISCpe7, transposase {ECO:0000313|EMBL:ABG86548.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying 25 items

View Taxonomy