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L3_098_030G1_scaffold_296

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_296_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..327
DNA (327bp) protein (109aa)
L-asparaginase, type I family protein {ECO:0000313|EMBL:KDS56384.1}; EC=3.5.1.1 {ECO:0000313|EMBL:KDS56384.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L-asparaginase, type I n=5 Tax=Bacteroides RepID=C6Z166_9BACE
1-alkyl-2-acetylglycerophosphocholine esterase
L3_098_030G1_scaffold_296_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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524..1213
DNA (690bp) protein (230aa)
Two-component system response regulator n=7 Tax=Bacteroides RepID=A6L7N3_BACV8
two-component system response regulator
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:EET14624.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_098_030G1_scaffold_296_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1232..3013
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Sensor protein n=5 Tax=Bacteroides RepID=E5UWS2_9BACE
two-component system sensor histidine kinase
L3_098_030G1_scaffold_296_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3485..4111)
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L7N6_BACV8
4'-phosphopantetheinyl transferase superfamily protein {ECO:0000313|EMBL:KDS56380.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_098_030G1_scaffold_296_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4120..5472)
DNA (1353bp) protein (451aa)
Gliding motility-associated protein GldE n=4 Tax=Bacteroides RepID=C6Z162_9BACE
Gliding motility-associated protein GldE {ECO:0000313|EMBL:EET14621.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hemolysin
L3_098_030G1_scaffold_296_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5509..5976)
DNA (468bp) protein (156aa)
Single-stranded DNA-binding protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IT90_BACVU
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
single-strand binding protein
L3_098_030G1_scaffold_296_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5991..7049)
DNA (1059bp) protein (353aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EET14619.1}; EC=3.2.2.- {ECO:0000313|EMBL:EET14619.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
A/G-specific adenine glycosylase n=2 Tax=Bacteroides RepID=C6Z160_9BACE
A/G-specific adenine glycosylase
L3_098_030G1_scaffold_296_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7229..7504
DNA (276bp) protein (92aa)
DNA-binding protein HU n=15 Tax=Bacteroides RepID=A6L7P0_BACV8
DNA-binding protein HU
DNA-binding protein HU-beta {ECO:0000313|EMBL:EOS04241.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_030G1_scaffold_296_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7743..9317
DNA (1575bp) protein (525aa)
Ribonuclease, Rne/Rng family domain protein {ECO:0000313|EMBL:KDS56375.1}; EC=3.1.4.- {ECO:0000313|EMBL:KDS56375.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Ribonuclease G n=11 Tax=Bacteroides RepID=A6L7P1_BACV8
ribonuclease G
L3_098_030G1_scaffold_296_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9489..10295)
DNA (807bp) protein (269aa)
N-acetylmuramoyl-L-alanine amidase n=8 Tax=root RepID=C6Z157_9BACE
N-acetylmuramoyl-L-alanine amidase
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDF17721.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_030G1_scaffold_296_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10302..10844)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7P3_BACV8
hypothetical protein
AhpC/TSA family protein {ECO:0000313|EMBL:KDS56373.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_030G1_scaffold_296_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11076..11684
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HSS5_BACVU
Putative membrane protein {ECO:0000313|EMBL:KDS56372.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
membrane protein
L3_098_030G1_scaffold_296_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11759..13489
DNA (1731bp) protein (577aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Bacteroides RepID=R7NWE0_9BACE
L3_098_030G1_scaffold_296_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13546..14541
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycerol-3-phosphate dehydrogenase n=7 Tax=Bacteroides RepID=A6L7P6_BACV8
glycerol-3-phosphate dehydrogenase
L3_098_030G1_scaffold_296_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14555..15898
DNA (1344bp) protein (448aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glucose-6-phosphate isomerase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=G6PI_BACV8
L3_098_030G1_scaffold_296_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16048..16782
DNA (735bp) protein (245aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Bacteroides vulgatus RepID=D4V4M5_BACVU
beta-phosphoglucomutase
Putative beta-phosphoglucomutase {ECO:0000313|EMBL:KDS56368.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_030G1_scaffold_296_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16895..18139)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P0E7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17728.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_098_030G1_scaffold_296_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18152..19741)
DNA (1590bp) protein (530aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M3_BACVU
Putative outer membrane protein {ECO:0000313|EMBL:KDS31648.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_098_030G1_scaffold_296_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19757..23494)
DNA (3738bp) protein (1246aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYH3_9BACE
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS31647.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_098_030G1_scaffold_296_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23642..24724)
DNA (1083bp) protein (361aa)
Sigma factor regulatory protein, FecR/PupR family n=4 Tax=Bacteroides RepID=D4V4M1_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR41716.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_098_030G1_scaffold_296_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24937..25527)
DNA (591bp) protein (197aa)
RNA polymerase ECF-type sigma factor n=4 Tax=Bacteroides RepID=A6L7Q3_BACV8
RNA polymerase sigma 70
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABR41717.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying 21 items

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